RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 ACAA2P42765 397 aaKnown RBP15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 MAGEA2P43356 314 aa15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 RNF144AP50876 292 aaPredicted RBP15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 MAP2K6P52564 334 aa15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 ZNF136P52737 540 aa15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 DLX5P56178 289 aa15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 OR5M10Q6IEU7 315 aa15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 PIWIL3Q7Z3Z3 882 aaKnown RBP15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 FAM109AQ8N4B1 249 aa15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 FAM86B1Q8N7N1 296 aa15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 ZNF563Q8TA94 476 aa15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 GPR119Q8TDV5 335 aa15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 CANT1Q8WVQ1 401 aa15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 DNAJA4Q8WW22 397 aaPredicted RBP15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 MRGPRX4Q96LA9 322 aa15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 PRRC1Q96M27 445 aa15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 GNRHR2Q96P88 292 aa15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 UBL7Q96S82 380 aaPredicted RBP15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 SEPHS2Q99611 448 aa15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 UBQLN3Q9H347 655 aa15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 DENND2DQ9H6A0 471 aaPredicted RBP15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 C12orf10Q9HB07 376 aa15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 RPS6KB2Q9UBS0 482 aa15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 AURKCQ9UQB9 309 aa15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 ENPP4Q9Y6X5 453 aa15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 V9GYQ6 96 aa15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 ATMQ13315 3056 aa15.43■□□□□ 0.06
SCAMP4-211ENST00000588907 BSNQ9UPA5 3926 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 BCAS1O75363 584 aaPredicted RBP15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 OR5F1O95221 314 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 GKN3PP0CG01 181 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 GP1BBP13224 206 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 FKBP2P26885 142 aaKnown RBP15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 RYKP34925 604 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 SLC1A3P43003 542 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 OR1E2P47887 323 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 SMIM11AP58511 58 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 TAS2R41P59536 307 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 PPIAP62937 165 aaKnown RBP15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 GK3PQ14409 553 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 QPRTQ15274 297 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 NDUFAF6Q330K2 333 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 DEF8Q6ZN54 512 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 PLEKHM3Q6ZWE6 761 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 GRINAQ7Z429 371 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 COMTD1Q86VU5 262 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 ZDHHC21Q8IVQ6 265 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 EXD3Q8N9H8 876 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 PAPD5Q8NDF8 572 aaKnown RBP15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 OR10Q1Q8NGQ4 319 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 C7orf34Q96L11 122 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 MCHR1Q99705 422 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 RSPO3Q9BXY4 272 aaPredicted RBP15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 OR2B2Q9GZK3 357 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 ACER3Q9NUN7 267 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 MED17Q9NVC6 651 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 ARMC1Q9NVT9 282 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 TAS2R10Q9NYW0 307 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 STOML1Q9UBI4 398 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 FBXL2Q9UKC9 423 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 LHX6Q9UPM6 363 aa15.42■□□□□ 0.06
SCAMP4-211ENST00000588907 USP24Q9UPU5 2620 aa15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 TRAPPC13A5PLN9 417 aa15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 PINLYPA6NC86 204 aa15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 H0YHG0 523 aa15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 TFECO14948 347 aaPredicted RBP15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 ADAMDEC1O15204 470 aa15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 OIP5O43482 229 aa15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 FRS3O43559 492 aa15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 FKBP6O75344 327 aa15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 HPNP05981 417 aa15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 PNMTP11086 282 aa15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 ELK4P28324 431 aa15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 IDH2P48735 452 aaKnown RBP15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 PLPPR5Q32ZL2 321 aa15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 PLEKHN1Q494U1 663 aaPredicted RBP15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 SLC25A53Q5H9E4 307 aa15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 ULK3Q6PHR2 472 aa15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 FAM180AQ6UWF9 173 aa15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 PHF10Q8WUB8 498 aaKnown RBP15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 ZNF300Q96RE9 604 aaPredicted RBP15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 PIGQQ9BRB3 760 aa15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 MFRPQ9BY79 579 aa15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 AMBRA1Q9C0C7 1298 aa15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 ANKRD19PQ9H560 264 aa15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 ACKR4Q9NPB9 350 aa15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 NDUFAF4Q9P032 175 aa15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 ACAD8Q9UKU7 415 aa15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 AP4S1Q9Y587 144 aa15.41■□□□□ 0.06
SCAMP4-211ENST00000588907 HEATR5AQ86XA9 2040 aa15.4■□□□□ 0.06
SCAMP4-211ENST00000588907 ANKRD65E5RJM6 399 aa15.4■□□□□ 0.06
SCAMP4-211ENST00000588907 HNRNPRO43390 633 aaKnown RBP15.4■□□□□ 0.06
SCAMP4-211ENST00000588907 KRT36O76013 467 aa15.4■□□□□ 0.06
SCAMP4-211ENST00000588907 PRG2P13727 222 aa15.4■□□□□ 0.06
SCAMP4-211ENST00000588907 PRKCAP17252 672 aa15.4■□□□□ 0.06
SCAMP4-211ENST00000588907 HK1P19367 917 aa15.4■□□□□ 0.06
SCAMP4-211ENST00000588907 TNFRSF1BP20333 461 aa15.4■□□□□ 0.06
SCAMP4-211ENST00000588907 APOBEC1P41238 236 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms