RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 NOVA1P51513 510 aaKnown RBP10.44□□□□□ -0.74
SMAD4-205ENST00000588745 TSPAN31Q12999 210 aa10.44□□□□□ -0.74
SMAD4-205ENST00000588745 APOFQ13790 326 aa10.44□□□□□ -0.74
SMAD4-205ENST00000588745 MAD2L1BPQ15013 274 aaPredicted RBP10.44□□□□□ -0.74
SMAD4-205ENST00000588745 PTGES3Q15185 160 aaKnown RBP10.44□□□□□ -0.74
SMAD4-205ENST00000588745 MEP1AQ16819 746 aa10.44□□□□□ -0.74
SMAD4-205ENST00000588745 WBP2NLQ6ICG8 309 aa10.44□□□□□ -0.74
SMAD4-205ENST00000588745 CBLN3Q6UW01 205 aa10.44□□□□□ -0.74
SMAD4-205ENST00000588745 NUP54Q7Z3B4 507 aa10.44□□□□□ -0.74
SMAD4-205ENST00000588745 MARCH3Q86UD3 253 aa10.44□□□□□ -0.74
SMAD4-205ENST00000588745 MISPQ8IVT2 679 aa10.44□□□□□ -0.74
SMAD4-205ENST00000588745 DEPDC4Q8N2C3 294 aa10.44□□□□□ -0.74
SMAD4-205ENST00000588745 SLC15A4Q8N697 577 aa10.44□□□□□ -0.74
SMAD4-205ENST00000588745 FAM81AQ8TBF8 368 aa10.44□□□□□ -0.74
SMAD4-205ENST00000588745 RNF138Q8WVD3 245 aa10.44□□□□□ -0.74
SMAD4-205ENST00000588745 DNAJA4Q8WW22 397 aaPredicted RBP10.44□□□□□ -0.74
SMAD4-205ENST00000588745 TTC9Q92623 222 aa10.44□□□□□ -0.74
SMAD4-205ENST00000588745 HDAC2Q92769 488 aaKnown RBP10.44□□□□□ -0.74
SMAD4-205ENST00000588745 C3orf49Q96BT1 292 aa10.44□□□□□ -0.74
SMAD4-205ENST00000588745 TMCO6Q96DC7 493 aa10.44□□□□□ -0.74
SMAD4-205ENST00000588745 SH3YL1Q96HL8 342 aaPredicted RBP10.44□□□□□ -0.74
SMAD4-205ENST00000588745 HS6ST2Q96MM7 605 aa10.44□□□□□ -0.74
SMAD4-205ENST00000588745 NODALQ96S42 347 aa10.44□□□□□ -0.74
SMAD4-205ENST00000588745 RASL10BQ96S79 203 aa10.44□□□□□ -0.74
SMAD4-205ENST00000588745 CCNL2Q96S94 520 aaPredicted RBP10.44□□□□□ -0.74
SMAD4-205ENST00000588745 PHOX2BQ99453 314 aa10.44□□□□□ -0.74
SMAD4-205ENST00000588745 ZNF426Q9BUY5 554 aa10.44□□□□□ -0.74
SMAD4-205ENST00000588745 SELENONQ9NZV5 590 aa10.44□□□□□ -0.74
SMAD4-205ENST00000588745 LOC101059948A0A1B0GTJ6 334 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 TRIM64A6NGJ6 449 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.43□□□□□ -0.74
SMAD4-205ENST00000588745 H3BN98 237 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 ADAM10O14672 748 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 HCRTR2O43614 444 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 IFI30P13284 250 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 PTNP21246 168 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 F8A1P23610 371 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 POU1F1P28069 291 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 GPR4P46093 362 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 IDH2P48735 452 aaKnown RBP10.43□□□□□ -0.74
SMAD4-205ENST00000588745 CTBP2P56545 445 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 PRKCDQ05655 676 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 IL10RAQ13651 578 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 NTRK2Q16620 822 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 RBM48Q5RL73 367 aaKnown RBP10.43□□□□□ -0.74
SMAD4-205ENST00000588745 C6orf141Q5SZD1 244 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 SLX4IPQ5VYV7 408 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 LINC00114Q6XXX2 140 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 RASSF6Q6ZTQ3 369 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 MRGPREQ86SM8 312 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 MEX3DQ86XN8 651 aaKnown RBP10.43□□□□□ -0.74
SMAD4-205ENST00000588745 KIF18BQ86Y91 864 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 MARCH9Q86YJ5 346 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 RAB43Q86YS6 212 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 ENTHD1Q8IYW4 607 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 OR5M3Q8NGP4 307 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 PFN4Q8NHR9 129 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 CNIH3Q8TBE1 160 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 ADAMTS14Q8WXS8 1223 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 SPACA9Q96E40 222 aaPredicted RBP10.43□□□□□ -0.74
SMAD4-205ENST00000588745 MRPS26Q9BYN8 205 aaKnown RBP10.43□□□□□ -0.74
SMAD4-205ENST00000588745 BATF3Q9NR55 127 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 FBXL4Q9UKA2 621 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 ICAM5Q9UMF0 924 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 RNF6Q9Y252 685 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 TMEM5Q9Y2B1 443 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 MED31Q9Y3C7 131 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 PCSK5Q92824 1860 aa10.43□□□□□ -0.74
SMAD4-205ENST00000588745 A0A087WUJ7 227 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 C17orf51A8MQB3 221 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 CDRT15L2A8MXV6 281 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 KPNA4O00629 521 aaPredicted RBP10.42□□□□□ -0.74
SMAD4-205ENST00000588745 ITGA10O75578 1167 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 IGFBP1P08833 259 aaPredicted RBP10.42□□□□□ -0.74
SMAD4-205ENST00000588745 ICAM2P13598 275 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 PGCP20142 388 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 MST1P26927 711 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 RBMS1P29558 406 aaKnown RBP10.42□□□□□ -0.74
SMAD4-205ENST00000588745 P2RX1P51575 399 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 CDC42P60953 191 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 CDK5R2Q13319 367 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 TOP3AQ13472 1001 aaPredicted RBP10.42□□□□□ -0.74
SMAD4-205ENST00000588745 CBFBQ13951 182 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 BROXQ5VW32 411 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 LAIR2Q6ISS4 152 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 IGF2-ASQ6U949 168 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 ARMC10Q8N2F6 343 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 GALNT15Q8N3T1 639 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 CLDN22Q8N7P3 220 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 OR5W2Q8NH69 310 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 ZNF563Q8TA94 476 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 APH1BQ8WW43 257 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 ZNF566Q969W8 418 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 PLA2G12AQ9BZM1 189 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 DSN1Q9H410 356 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 MEPEQ9NQ76 525 aaPredicted RBP10.42□□□□□ -0.74
SMAD4-205ENST00000588745 C20orf141Q9NUB4 165 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 RYDENQ9NUL5 291 aaKnown RBP10.42□□□□□ -0.74
SMAD4-205ENST00000588745 IMPAD1Q9NX62 359 aa10.42□□□□□ -0.74
SMAD4-205ENST00000588745 P4HTMQ9NXG6 502 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms