RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 TFDP2Q14188 446 aa5.75□□□□□ -1.49
TPM4-210ENST00000588507 MAD2L1BPQ15013 274 aaPredicted RBP5.75□□□□□ -1.49
TPM4-210ENST00000588507 AP5B1Q2VPB7 878 aa5.75□□□□□ -1.49
TPM4-210ENST00000588507 UBE3DQ7Z6J8 389 aa5.75□□□□□ -1.49
TPM4-210ENST00000588507 GPR180Q86V85 440 aa5.75□□□□□ -1.49
TPM4-210ENST00000588507 KLHDC8BQ8IXV7 354 aa5.75□□□□□ -1.49
TPM4-210ENST00000588507 OR52E4Q8NGH9 312 aa5.75□□□□□ -1.49
TPM4-210ENST00000588507 OR2T6Q8NHC8 308 aa5.75□□□□□ -1.49
TPM4-210ENST00000588507 IPCEF1Q8WWN9 437 aaPredicted RBP5.75□□□□□ -1.49
TPM4-210ENST00000588507 LPGAT1Q92604 370 aa5.75□□□□□ -1.49
TPM4-210ENST00000588507 HIST1H2AHQ96KK5 128 aa5.75□□□□□ -1.49
TPM4-210ENST00000588507 RNF145Q96MT1 663 aa5.75□□□□□ -1.49
TPM4-210ENST00000588507 NPAS1Q99742 590 aa5.75□□□□□ -1.49
TPM4-210ENST00000588507 HIST1H2AJQ99878 128 aa5.75□□□□□ -1.49
TPM4-210ENST00000588507 H2AFJQ9BTM1 129 aa5.75□□□□□ -1.49
TPM4-210ENST00000588507 ISCUQ9H1K1 167 aa5.75□□□□□ -1.49
TPM4-210ENST00000588507 MYLK2Q9H1R3 596 aa5.75□□□□□ -1.49
TPM4-210ENST00000588507 C10orf88Q9H8K7 445 aa5.75□□□□□ -1.49
TPM4-210ENST00000588507 LRRC40Q9H9A6 602 aa5.75□□□□□ -1.49
TPM4-210ENST00000588507 INPP5EQ9NRR6 644 aa5.75□□□□□ -1.49
TPM4-210ENST00000588507 VPREB3Q9UKI3 123 aa5.75□□□□□ -1.49
TPM4-210ENST00000588507 HIF3AQ9Y2N7 669 aa5.75□□□□□ -1.49
TPM4-210ENST00000588507 HSPG2P98160 4391 aa5.75□□□□□ -1.49
TPM4-210ENST00000588507 C7orf72A4D263 438 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 RTCAO00442 366 aaKnown RBP5.74□□□□□ -1.49
TPM4-210ENST00000588507 PFDN6O15212 129 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 FADS1O60427 444 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 CST8O60676 142 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 CYTIPO60759 359 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 SCELO95171 688 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 THY1P04216 161 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 FAHP16930 419 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 UQCRC2P22695 453 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 ADRA1DP25100 572 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 SHC1P29353 583 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 CLK3P49761 638 aaKnown RBP5.74□□□□□ -1.49
TPM4-210ENST00000588507 GNB2P62879 340 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 SNTB2Q13425 540 aaKnown RBP5.74□□□□□ -1.49
TPM4-210ENST00000588507 LAPTM5Q13571 262 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 ODF2Q5BJF6 829 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 UGT3A1Q6NUS8 523 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 PALM2Q8IXS6 379 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 NEK11Q8NG66 645 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 GIMAP7Q8NHV1 300 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 MRGPRX4Q96LA9 322 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 PRR25Q96S07 402 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 DNAJC7Q99615 494 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 RTN4RQ9BZR6 473 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 VPS11Q9H270 941 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 PPA2Q9H2U2 334 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 CRNNQ9UBG3 495 aaPredicted RBP5.74□□□□□ -1.49
TPM4-210ENST00000588507 PHF11Q9UIL8 331 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 ZNF346Q9UL40 294 aaKnown RBP5.74□□□□□ -1.49
TPM4-210ENST00000588507 GPR55Q9Y2T6 319 aaPredicted RBP5.74□□□□□ -1.49
TPM4-210ENST00000588507 NOSIPQ9Y314 301 aaKnown RBP5.74□□□□□ -1.49
TPM4-210ENST00000588507 KCNE2Q9Y6J6 123 aa5.74□□□□□ -1.49
TPM4-210ENST00000588507 A0A1W2PRX2 142 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 GLOD5A6NK44 160 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 GJE1A6NN92 205 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 H7C0C1 242 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 FOXE1O00358 373 aaPredicted RBP5.73□□□□□ -1.49
TPM4-210ENST00000588507 CLIC3O95833 236 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 GAS8O95995 478 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 IGLV1-44P01699 117 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 C8GP07360 202 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 C1GALT1C1LP0DN25 315 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 SSR2P43308 183 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 ATP5OP48047 213 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 RAC3P60763 192 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 SEC61A1P61619 476 aaKnown RBP5.73□□□□□ -1.49
TPM4-210ENST00000588507 CCL8P80075 99 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 C17orf67Q0P5P2 114 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 CSTF3Q12996 717 aaKnown RBP5.73□□□□□ -1.49
TPM4-210ENST00000588507 SLBPQ14493 270 aaKnown RBP eCLIP5.73□□□□□ -1.49
TPM4-210ENST00000588507 RAB39AQ14964 217 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 MSMPQ1L6U9 139 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 MSS51Q4VC12 460 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 HIKESHIQ53FT3 197 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 HSP90AA4PQ58FG1 418 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 VN1R5Q7Z5H4 357 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 SDCCAG8Q86SQ7 713 aaPredicted RBP5.73□□□□□ -1.49
TPM4-210ENST00000588507 THOC6Q86W42 341 aaKnown RBP5.73□□□□□ -1.49
TPM4-210ENST00000588507 KRT78Q8N1N4 520 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 OTUD6BQ8N6M0 293 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 MAPKAPK5-AS1Q8N8E1 139 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 ZNF527Q8NB42 609 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 RNF214Q8ND24 703 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 FBXO27Q8NI29 283 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 WDR20Q8TBZ3 569 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 GATAD2BQ8WXI9 593 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 ALG3Q92685 438 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 PEX13Q92968 403 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 EFHD2Q96C19 240 aaPredicted RBP5.73□□□□□ -1.49
TPM4-210ENST00000588507 HAUS1Q96CS2 278 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 ITCHQ96J02 903 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 MCRIP2Q9BUT9 160 aaKnown RBP5.73□□□□□ -1.49
TPM4-210ENST00000588507 TRIM15Q9C019 465 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 NT5DC2Q9H857 520 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 SEC61A2Q9H9S3 476 aa5.73□□□□□ -1.49
TPM4-210ENST00000588507 PATZ1Q9HBE1 687 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms