RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 OSBPL10Q9BXB5 764 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 ANGPTL4Q9BY76 406 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 TRIM2Q9C040 744 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 POLR2J2Q9GZM3 115 aaKnown RBP10.31□□□□□ -0.76
VMP1-207ENST00000588131 POLR2J3Q9H1A7 115 aaKnown RBP10.31□□□□□ -0.76
VMP1-207ENST00000588131 VCX3BQ9H321 246 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 ZNF552Q9H707 407 aaPredicted RBP10.31□□□□□ -0.76
VMP1-207ENST00000588131 TMEM27Q9HBJ8 222 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 PLA2G3Q9NZ20 509 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 MED11Q9P086 117 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 PPP4R1LQ9P1A2 415 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 TEKT2Q9UIF3 430 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 DCHS1Q96JQ0 3298 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 A0A087WUU8 490 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 IGLV3-32A0A0A0MS00 114 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 A0A0G2JMM0 328 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 A0A1W2PPB8 328 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 A0A1W2PRS3 328 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 SH3PXD2BA1X283 911 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 C7orf72A4D263 438 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 KIR3DP1A8MWS1 328 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 G3V3Y1 287 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 DLGAP1O14490 977 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 CCNB2O95067 398 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 WISP1O95388 367 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 WDPCPO95876 746 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 ALPLP05186 524 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 PTNP21246 168 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 ITPKBP27987 946 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 EIF2S3P41091 472 aaKnown RBP10.3□□□□□ -0.76
VMP1-207ENST00000588131 SLC6A8P48029 635 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 CYB561P49447 251 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 DAPP51397 102 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 P2RX1P51575 399 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 CCL11P51671 97 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 ARHGDIAP52565 204 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 SMIM11AP58511 58 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 PPP2R2BQ00005 443 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 KCNAB2Q13303 367 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 DCST1Q5T197 706 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 SLC22A10Q63ZE4 541 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 SLC30A6Q6NXT4 461 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 ISLR2Q6UXK2 745 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 PACRGLQ8N7B6 248 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 TOR1AIP2Q8NFQ8 470 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 FDCSPQ8NFU4 85 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 OR2M3Q8NG83 312 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 OR5W2Q8NH69 310 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 MAGEE2Q8TD90 523 aaPredicted RBP10.3□□□□□ -0.76
VMP1-207ENST00000588131 GIPC3Q8TF64 312 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 TMEM255BQ8WV15 326 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 SDCCAG3Q96C92 435 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 SGCZQ96LD1 299 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 FRMD6Q96NE9 622 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 SIGLEC12Q96PQ1 595 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 DSN1Q9H410 356 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 ANKRD19PQ9H560 264 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 CPNE5Q9HCH3 593 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 USE1Q9NZ43 259 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 LRFN1Q9P244 771 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 ABI3Q9P2A4 366 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 TMCC3Q9ULS5 477 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 KCNMB2Q9Y691 235 aa10.3□□□□□ -0.76
VMP1-207ENST00000588131 EML6Q6ZMW3 1958 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 ANKUB1A6NFN9 424 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 FAAHO00519 579 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 GNB5O14775 395 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 CHP2O43745 196 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 PIP5K1CO60331 668 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 CDC40O60508 579 aaKnown RBP eCLIP10.29□□□□□ -0.76
VMP1-207ENST00000588131 NEURL1O76050 574 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 NUDT14O95848 222 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 HPRP00739 348 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 THRBP10828 461 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 IFNA8P32881 189 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 CASRP41180 1078 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 DNASE1L1P49184 302 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 ALDH3A2P51648 485 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 UGT2B15P54855 530 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 COPZ1P61923 177 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 MFAP5Q13361 173 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 SNTA1Q13424 505 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 CBFBQ13951 182 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 GK3PQ14409 553 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 QPRTQ15274 297 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 ALG10BQ5I7T1 473 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 AGAP7PQ5VUJ5 663 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 WBP2NLQ6ICG8 309 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 SPINK14Q6IE38 97 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 ZNF770Q6IQ21 691 aaPredicted RBP10.29□□□□□ -0.76
VMP1-207ENST00000588131 FAHD1Q6P587 224 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 CCDC81Q6ZN84 652 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 PRICKLE2Q7Z3G6 844 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 MEX3DQ86XN8 651 aaKnown RBP10.29□□□□□ -0.76
VMP1-207ENST00000588131 APLFQ8IW19 511 aaPredicted RBP10.29□□□□□ -0.76
VMP1-207ENST00000588131 FADS6Q8N9I5 356 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 WDSUB1Q8N9V3 476 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 PSD4Q8NDX1 1056 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 OR4K5Q8NGD3 323 aa10.29□□□□□ -0.76
VMP1-207ENST00000588131 ZNF563Q8TA94 476 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms