RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 PAIP1Q9H074 479 aaKnown RBP13.33□□□□□ -0.28
ATG4D-207ENST00000587256 SLC38A1Q9H2H9 487 aa13.33□□□□□ -0.28
ATG4D-207ENST00000587256 CACYBPQ9HB71 228 aaKnown RBP13.33□□□□□ -0.28
ATG4D-207ENST00000587256 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.33□□□□□ -0.28
ATG4D-207ENST00000587256 FGFR1OP2Q9NVK5 253 aa13.33□□□□□ -0.28
ATG4D-207ENST00000587256 TMEM45AQ9NWC5 275 aa13.33□□□□□ -0.28
ATG4D-207ENST00000587256 PAQR5Q9NXK6 330 aaPredicted RBP13.33□□□□□ -0.28
ATG4D-207ENST00000587256 CALML5Q9NZT1 146 aa13.33□□□□□ -0.28
ATG4D-207ENST00000587256 MCTS1Q9ULC4 181 aaKnown RBP13.33□□□□□ -0.28
ATG4D-207ENST00000587256 PCDHB14Q9Y5E9 798 aa13.33□□□□□ -0.28
ATG4D-207ENST00000587256 PCNX3Q9H6A9 2034 aa13.33□□□□□ -0.28
ATG4D-207ENST00000587256 ADGRG4Q8IZF6 3080 aa13.33□□□□□ -0.28
ATG4D-207ENST00000587256 ITPR2Q14571 2701 aa13.33□□□□□ -0.28
ATG4D-207ENST00000587256 HCFC1P51610 2035 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 A0A1W2PNV4 684 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 AGAP5A6NIR3 686 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 GJE1A6NN92 205 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 TNFSF11O14788 317 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 CXCL13O43927 109 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 VIMP08670 466 aaKnown RBP13.32□□□□□ -0.28
ATG4D-207ENST00000587256 PGCP20142 388 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 IL11P20809 199 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 ADH6P28332 368 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 SSTR2P30874 369 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 PGM1P36871 562 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 CRISP3P54108 245 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 SIRPAP78324 504 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 KCNJ10P78508 379 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 GUCY1A3Q02108 690 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 SELENBP1Q13228 472 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 LUZP2Q86TE4 346 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 DMRTC2Q8IXT2 367 aaPredicted RBP13.32□□□□□ -0.28
ATG4D-207ENST00000587256 FAM71CQ8NEG0 241 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 ATP6V1C2Q8NEY4 427 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 TMEM234Q8WY98 164 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 ST8SIA1Q92185 356 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 RNASE6Q93091 150 aaKnown RBP13.32□□□□□ -0.28
ATG4D-207ENST00000587256 ADGRG7Q96K78 797 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 TREX2Q9BQ50 279 aaPredicted RBP13.32□□□□□ -0.28
ATG4D-207ENST00000587256 TMEM120AQ9BXJ8 343 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 SLC24A3Q9HC58 644 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 THUMPD1Q9NXG2 353 aaKnown RBP13.32□□□□□ -0.28
ATG4D-207ENST00000587256 FOXD3Q9UJU5 478 aaPredicted RBP13.32□□□□□ -0.28
ATG4D-207ENST00000587256 PACSIN3Q9UKS6 424 aa13.32□□□□□ -0.28
ATG4D-207ENST00000587256 ANKHD1Q8IWZ3 2542 aaKnown RBP13.32□□□□□ -0.28
ATG4D-207ENST00000587256 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.31□□□□□ -0.28
ATG4D-207ENST00000587256 CLDN24A6NM45 220 aa13.31□□□□□ -0.28
ATG4D-207ENST00000587256 CLIC1O00299 241 aa13.31□□□□□ -0.28
ATG4D-207ENST00000587256 BCAS1O75363 584 aaPredicted RBP13.31□□□□□ -0.28
ATG4D-207ENST00000587256 SMNDC1O75940 238 aaKnown RBP eCLIP13.31□□□□□ -0.28
ATG4D-207ENST00000587256 PLGP00747 810 aaPredicted RBP13.31□□□□□ -0.28
ATG4D-207ENST00000587256 CRHP06850 196 aa13.31□□□□□ -0.28
ATG4D-207ENST00000587256 DBIP07108 87 aaKnown RBP13.31□□□□□ -0.28
ATG4D-207ENST00000587256 IL7RP16871 459 aa13.31□□□□□ -0.28
ATG4D-207ENST00000587256 SHC1P29353 583 aa13.31□□□□□ -0.28
ATG4D-207ENST00000587256 SLC7A1P30825 629 aa13.31□□□□□ -0.28
ATG4D-207ENST00000587256 RYKP34925 604 aa13.31□□□□□ -0.28
ATG4D-207ENST00000587256 CPOXP36551 454 aa13.31□□□□□ -0.28
ATG4D-207ENST00000587256 PEX19P40855 299 aa13.31□□□□□ -0.28
ATG4D-207ENST00000587256 EEF1A1P68104 462 aaKnown RBP13.31□□□□□ -0.28
ATG4D-207ENST00000587256 FADDQ13158 208 aa13.31□□□□□ -0.28
ATG4D-207ENST00000587256 RGNQ15493 299 aa13.31□□□□□ -0.28
ATG4D-207ENST00000587256 CTU2Q2VPK5 515 aaKnown RBP13.31□□□□□ -0.28
ATG4D-207ENST00000587256 FBXL19-AS1Q494R0 122 aa13.31□□□□□ -0.28
ATG4D-207ENST00000587256 RPS26P11Q5JNZ5 115 aaPredicted RBP13.31□□□□□ -0.28
ATG4D-207ENST00000587256 LRIF1Q5T3J3 769 aa13.31□□□□□ -0.28
ATG4D-207ENST00000587256 EEF1A1P5Q5VTE0 462 aa13.31□□□□□ -0.28
ATG4D-207ENST00000587256 C3orf33Q6P1S2 294 aa13.31□□□□□ -0.28
ATG4D-207ENST00000587256 CMIPQ8IY22 773 aa13.31□□□□□ -0.28
ATG4D-207ENST00000587256 PEX5LQ8IYB4 626 aa13.31□□□□□ -0.28
ATG4D-207ENST00000587256 ZNF563Q8TA94 476 aa13.31□□□□□ -0.28
ATG4D-207ENST00000587256 ZG16BQ96DA0 208 aa13.31□□□□□ -0.28
ATG4D-207ENST00000587256 TMEM19Q96HH6 336 aa13.31□□□□□ -0.28
ATG4D-207ENST00000587256 PIGMQ9H3S5 423 aa13.31□□□□□ -0.28
ATG4D-207ENST00000587256 MTHFD2LQ9H903 347 aaPredicted RBP13.31□□□□□ -0.28
ATG4D-207ENST00000587256 RNF122Q9H9V4 155 aa13.31□□□□□ -0.28
ATG4D-207ENST00000587256 EXOSC3Q9NQT5 275 aaKnown RBP13.31□□□□□ -0.28
ATG4D-207ENST00000587256 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.31□□□□□ -0.28
ATG4D-207ENST00000587256 TEX15Q9BXT5 2789 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 CACNA1DQ01668 2161 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 A0A0J9YW62 118 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 A0A1W2PP18 115 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 C5orf58C9J3I9 102 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 SYT5O00445 386 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 ANGPT2O15123 496 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 ADAMDEC1O15204 470 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 TNFSF13O75888 250 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 AQP8O94778 261 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 NTN1O95631 604 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 NID1P14543 1247 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 UQCRBP14927 111 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 HOXB9P17482 250 aaPredicted RBP13.3□□□□□ -0.28
ATG4D-207ENST00000587256 RPS4Y1P22090 263 aaKnown RBP13.3□□□□□ -0.28
ATG4D-207ENST00000587256 PPIBP23284 216 aaKnown RBP13.3□□□□□ -0.28
ATG4D-207ENST00000587256 SLC6A8P48029 635 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 DLX5P56178 289 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 SESN3P58005 492 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 TLE4Q04727 773 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 MERTKQ12866 999 aa13.3□□□□□ -0.28
ATG4D-207ENST00000587256 SF3A3Q12874 501 aaKnown RBP eCLIP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms