RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 OSGIN1Q9UJX0 560 aa10.39□□□□□ -0.75
LIG3-204ENST00000585740 B3GNT3Q9Y2A9 372 aa10.39□□□□□ -0.75
LIG3-204ENST00000585740 LSM2Q9Y333 95 aaKnown RBP10.39□□□□□ -0.75
LIG3-204ENST00000585740 MAU2Q9Y6X3 613 aa10.39□□□□□ -0.75
LIG3-204ENST00000585740 CEP250Q9BV73 2442 aa10.39□□□□□ -0.75
LIG3-204ENST00000585740 ARID1BQ8NFD5 2236 aaPredicted RBP10.39□□□□□ -0.75
LIG3-204ENST00000585740 TCRBV16S1A1N1A0A5B0 115 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 OR6C76A6NM76 312 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 HRKO00198 91 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 CSTAP01040 98 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 FOLR1P15328 257 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 HTR1FP30939 366 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 OR1D4P47884 311 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 MTNR1AP48039 350 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 SLC37A1P57057 533 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 COPZ1P61923 177 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 ALG10BQ5I7T1 473 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 CLEC12AQ5QGZ9 265 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 AADACL4Q5VUY2 407 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 SLC30A6Q6NXT4 461 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 SMARCD3Q6STE5 483 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 KANSL1Q7Z3B3 1105 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 MEX3DQ86XN8 651 aaKnown RBP10.38□□□□□ -0.75
LIG3-204ENST00000585740 LNX2Q8N448 690 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 FAM181AQ8N9Y4 354 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 PLPP5Q8NEB5 264 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 PTPMT1Q8WUK0 201 aaPredicted RBP10.38□□□□□ -0.75
LIG3-204ENST00000585740 NAT6Q93015 286 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 ZNF501Q96CX3 271 aaPredicted RBP10.38□□□□□ -0.75
LIG3-204ENST00000585740 LCORQ96JN0 433 aaPredicted RBP10.38□□□□□ -0.75
LIG3-204ENST00000585740 LRFN5Q96NI6 719 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 DACH2Q96NX9 599 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 OPALINQ96PE5 141 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 OR5M11Q96RB7 305 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 ZNF426Q9BUY5 554 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 TAPBPLQ9BX59 468 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 DPH1Q9BZG8 443 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 MMP27Q9H306 513 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 UBQLN3Q9H347 655 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 HHATLQ9HCP6 504 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 EXOSC3Q9NQT5 275 aaKnown RBP10.38□□□□□ -0.75
LIG3-204ENST00000585740 FBXO8Q9NRD0 319 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 UBQLN4Q9NRR5 601 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 FGF21Q9NSA1 209 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 PILRBQ9UKJ0 227 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 DTX4Q9Y2E6 619 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 CLCA3PQ9Y6N3 262 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 CABIN1Q9Y6J0 2220 aa10.38□□□□□ -0.75
LIG3-204ENST00000585740 SCDO00767 359 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 ARHGAP33O14559 1287 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 CDC42EP2O14613 210 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 LAMTOR5O43504 91 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 IGF2P01344 180 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 SAGP10523 405 aaPredicted RBP10.37□□□□□ -0.75
LIG3-204ENST00000585740 TDGF1P13385 188 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 HPGDP15428 266 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 MAKP20794 623 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 PSMA1P25786 263 aaKnown RBP10.37□□□□□ -0.75
LIG3-204ENST00000585740 SLC6A6P31641 620 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 HOXD12P35452 270 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 SOX6P35712 828 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 SLC9A3P48764 834 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 BMXP51813 675 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 WNT4P56705 351 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 RP1P56715 2156 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 PLAURQ03405 335 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 KLHL26Q53HC5 615 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 HLA-DQA1Q5Y7H0 255 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 C16orf87Q6PH81 154 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 LINC00114Q6XXX2 140 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 WDR88Q6ZMY6 472 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 PSD4Q8NDX1 1056 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 OR6Q1Q8NGQ2 317 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 PFN4Q8NHR9 129 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 GRHL3Q8TE85 626 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 SH3YL1Q96HL8 342 aaPredicted RBP10.37□□□□□ -0.75
LIG3-204ENST00000585740 JAM3Q9BX67 310 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 SLC19A3Q9BZV2 496 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 SLC7A5P2Q9GIP4 190 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 FLRT3Q9NZU0 649 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 DHCR7Q9UBM7 475 aaKnown RBP10.37□□□□□ -0.75
LIG3-204ENST00000585740 COPS7AQ9UBW8 275 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 ICAM5Q9UMF0 924 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 EXOGQ9Y2C4 368 aaKnown RBP10.37□□□□□ -0.75
LIG3-204ENST00000585740 CFAP47Q6ZTR5 3102 aa10.37□□□□□ -0.75
LIG3-204ENST00000585740 SEC16AO15027 2179 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 ASXL3Q9C0F0 2248 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 LOC100506127A0A0U1RQW1 187 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 METTL15A6NJ78 407 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 A8MU76 341 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 BHLHE40O14503 412 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 TO15178 435 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 HYAL3O43820 417 aaPredicted RBP10.36□□□□□ -0.75
LIG3-204ENST00000585740 PTP4A3O75365 173 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 NTN1O95631 604 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 DDAH2O95865 285 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 IFNGP01579 166 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 IGKV3-11P04433 115 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 ADRA2AP08913 450 aa10.36□□□□□ -0.75
LIG3-204ENST00000585740 HBQ1P09105 142 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms