RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	GSN	P06396	782 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	PRKCA	P17252	672 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	ADH6	P28332	368 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	SHC1	P29353	583 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	KIR2DL3	P43628	341 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	EIF1AX	P47813	144 aa	Known RBP	11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	IDH3A	P50213	366 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	MVD	P53602	400 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	EEF1A1	P68104	462 aa	Known RBP	11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	TXNL4A	P83876	142 aa	Known RBP	11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	PLAUR	Q03405	335 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	FGFBP1	Q14512	234 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	TIGD2	Q4W5G0	525 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	COX20	Q5RI15	118 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	EEF1A1P5	Q5VTE0	462 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	ZNF621	Q6ZSS3	439 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	MSANTD1	Q6ZTZ1	278 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	ESPNL	Q6ZVH7	1005 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	ZNF619	Q8N2I2	560 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	MIER2	Q8N344	545 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	TMCO5A	Q8N6Q1	288 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	OR5W2	Q8NH69	310 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	PNPT1	Q8TCS8	783 aa	Known RBP	11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	DYDC1	Q8WWB3	177 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	MRGPRX4	Q96LA9	322 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	GPATCH1	Q9BRR8	931 aa	Known RBP	11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	CLEC4M	Q9H2X3	399 aa	Predicted RBP	11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	PIGM	Q9H3S5	423 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	INTS9	Q9NV88	658 aa	Known RBP	11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	GALNT8	Q9NY28	637 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	CRIM1	Q9NZV1	1036 aa		11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760	GPC6	Q9Y625	555 aa	Predicted RBP	11.94	□□□□□ -0.5
SREBF1-223	ENST00000584760		A0A0J9YW62	118 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	FAM234B	A2RU67	622 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760		A8MXE2	369 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	TNFSF11	O14788	317 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	MSTN	O14793	375 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	EFNA2	O43921	213 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	BCAS1	O75363	584 aa	Predicted RBP	11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	H6PD	O95479	791 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	CSTA	P01040	98 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	OPN1LW	P04000	364 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	CHRM4	P08173	479 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	ZCCHC18	P0CG32	403 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	FCGR2A	P12318	317 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	NID1	P14543	1247 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	FOSL1	P15407	271 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	ME2	P23368	584 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	KIR2DL2	P43627	348 aa	Predicted RBP	11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	SLC6A8	P48029	635 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	CCR4	P51679	360 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	POLR2J	P52435	117 aa	Known RBP	11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	ADAM8	P78325	824 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	HPCA	P84074	193 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	LTB	Q06643	244 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	CBFB	Q13951	182 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	QPRT	Q15274	297 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	SGCB	Q16585	318 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	GTDC1	Q4AE62	458 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	SLC25A53	Q5H9E4	307 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	VWA1	Q6PCB0	445 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	LUZP2	Q86TE4	346 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	KIF18B	Q86Y91	864 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	ANKFN1	Q8N957	763 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	CNEP1R1	Q8N9A8	125 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	OR2V1	Q8NHB1	315 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	FBXO27	Q8NI29	283 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	ZFP90	Q8TF47	636 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	CKAP2	Q8WWK9	683 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	VPS33A	Q96AX1	596 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	ZG16B	Q96DA0	208 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	STARD4	Q96DR4	205 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	KLHL15	Q96M94	604 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	TRNT1	Q96Q11	434 aa	Known RBP	11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	CCDC28B	Q9BUN5	200 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	RBM24	Q9BX46	236 aa	Known RBP	11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	LAT2	Q9GZY6	243 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	QRSL1	Q9H0R6	528 aa	Known RBP	11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	SLC38A1	Q9H2H9	487 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	PAQR5	Q9NXK6	330 aa	Predicted RBP	11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	ACAN	P16112	2415 aa		11.93	□□□□□ -0.5
SREBF1-223	ENST00000584760	KRT75	O95678	551 aa		11.92	□□□□□ -0.5
SREBF1-223	ENST00000584760	UBTFL6	P0CB48	400 aa	Predicted RBP	11.92	□□□□□ -0.5
SREBF1-223	ENST00000584760	HOXB9	P17482	250 aa	Predicted RBP	11.92	□□□□□ -0.5
SREBF1-223	ENST00000584760	RPS4Y1	P22090	263 aa	Known RBP	11.92	□□□□□ -0.5
SREBF1-223	ENST00000584760	SFTPD	P35247	375 aa		11.92	□□□□□ -0.5
SREBF1-223	ENST00000584760	PGM1	P36871	562 aa		11.92	□□□□□ -0.5
SREBF1-223	ENST00000584760	MAGEA8	P43361	318 aa		11.92	□□□□□ -0.5
SREBF1-223	ENST00000584760	CPA2	P48052	419 aa		11.92	□□□□□ -0.5
SREBF1-223	ENST00000584760	ANXA11	P50995	505 aa	Known RBP	11.92	□□□□□ -0.5
SREBF1-223	ENST00000584760	AQP5	P55064	265 aa		11.92	□□□□□ -0.5
SREBF1-223	ENST00000584760	SIRPA	P78324	504 aa		11.92	□□□□□ -0.5
SREBF1-223	ENST00000584760	CHRNE	Q04844	493 aa		11.92	□□□□□ -0.5
SREBF1-223	ENST00000584760	SELENBP1	Q13228	472 aa		11.92	□□□□□ -0.5
SREBF1-223	ENST00000584760	MAPK11	Q15759	364 aa		11.92	□□□□□ -0.5
SREBF1-223	ENST00000584760	SYPL1	Q16563	259 aa		11.92	□□□□□ -0.5
SREBF1-223	ENST00000584760	GPAT3	Q53EU6	434 aa		11.92	□□□□□ -0.5
SREBF1-223	ENST00000584760	HBM	Q6B0K9	141 aa		11.92	□□□□□ -0.5
SREBF1-223	ENST00000584760	EIF3M	Q7L2H7	374 aa	Known RBP	11.92	□□□□□ -0.5
SREBF1-223	ENST00000584760	BTLA	Q7Z6A9	289 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms