RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 CTAG2O75638 210 aa18.32■□□□□ 0.52
SS18-224ENST00000584083 TGDSO95455 350 aa18.32■□□□□ 0.52
SS18-224ENST00000584083 KRT75O95678 551 aa18.32■□□□□ 0.52
SS18-224ENST00000584083 GUSBP08236 651 aa18.32■□□□□ 0.52
SS18-224ENST00000584083 UBTFL6P0CB48 400 aaPredicted RBP18.32■□□□□ 0.52
SS18-224ENST00000584083 CARD18P57730 90 aa18.32■□□□□ 0.52
SS18-224ENST00000584083 STX1BP61266 288 aa18.32■□□□□ 0.52
SS18-224ENST00000584083 PPP2R2AP63151 447 aa18.32■□□□□ 0.52
SS18-224ENST00000584083 TXNL4AP83876 142 aaKnown RBP18.32■□□□□ 0.52
SS18-224ENST00000584083 FUT5Q11128 374 aa18.32■□□□□ 0.52
SS18-224ENST00000584083 FGFBP1Q14512 234 aa18.32■□□□□ 0.52
SS18-224ENST00000584083 MAPK14Q16539 360 aa18.32■□□□□ 0.52
SS18-224ENST00000584083 FRRS1Q6ZNA5 592 aa18.32■□□□□ 0.52
SS18-224ENST00000584083 OR9I1Q8NGQ6 314 aa18.32■□□□□ 0.52
SS18-224ENST00000584083 OSTF1Q92882 214 aa18.32■□□□□ 0.52
SS18-224ENST00000584083 ITCHQ96J02 903 aa18.32■□□□□ 0.52
SS18-224ENST00000584083 MRGPRX4Q96LA9 322 aa18.32■□□□□ 0.52
SS18-224ENST00000584083 GPATCH1Q9BRR8 931 aaKnown RBP18.32■□□□□ 0.52
SS18-224ENST00000584083 POLDIP3Q9BY77 421 aaKnown RBP18.32■□□□□ 0.52
SS18-224ENST00000584083 SAP130Q9H0E3 1048 aa18.32■□□□□ 0.52
SS18-224ENST00000584083 OPN3Q9H1Y3 402 aaPredicted RBP18.32■□□□□ 0.52
SS18-224ENST00000584083 TCF7L2Q9NQB0 619 aa18.32■□□□□ 0.52
SS18-224ENST00000584083 LIPT1Q9Y234 373 aa18.32■□□□□ 0.52
SS18-224ENST00000584083 GJE1A6NN92 205 aa18.31■□□□□ 0.52
SS18-224ENST00000584083 EFNA2O43921 213 aa18.31■□□□□ 0.52
SS18-224ENST00000584083 H6PDO95479 791 aa18.31■□□□□ 0.52
SS18-224ENST00000584083 EPXP11678 715 aa18.31■□□□□ 0.52
SS18-224ENST00000584083 SHC1P29353 583 aa18.31■□□□□ 0.52
SS18-224ENST00000584083 IDH3AP50213 366 aa18.31■□□□□ 0.52
SS18-224ENST00000584083 CTBP2P56545 445 aa18.31■□□□□ 0.52
SS18-224ENST00000584083 CHRNEQ04844 493 aa18.31■□□□□ 0.52
SS18-224ENST00000584083 SKP2Q13309 424 aa18.31■□□□□ 0.52
SS18-224ENST00000584083 SYPL1Q16563 259 aa18.31■□□□□ 0.52
SS18-224ENST00000584083 TMEM176BQ3YBM2 270 aaPredicted RBP18.31■□□□□ 0.52
SS18-224ENST00000584083 TIGD2Q4W5G0 525 aa18.31■□□□□ 0.52
SS18-224ENST00000584083 COX20Q5RI15 118 aa18.31■□□□□ 0.52
SS18-224ENST00000584083 FBXW10Q5XX13 1052 aa18.31■□□□□ 0.52
SS18-224ENST00000584083 HMGN2P46Q86SG4 172 aa18.31■□□□□ 0.52
SS18-224ENST00000584083 ANKFN1Q8N957 763 aa18.31■□□□□ 0.52
SS18-224ENST00000584083 OIT3Q8WWZ8 545 aa18.31■□□□□ 0.52
SS18-224ENST00000584083 ZG16BQ96DA0 208 aa18.31■□□□□ 0.52
SS18-224ENST00000584083 TRNT1Q96Q11 434 aaKnown RBP18.31■□□□□ 0.52
SS18-224ENST00000584083 TIGARQ9NQ88 270 aa18.31■□□□□ 0.52
SS18-224ENST00000584083 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.31■□□□□ 0.52
SS18-224ENST00000584083 CLEC4AQ9UMR7 237 aa18.31■□□□□ 0.52
SS18-224ENST00000584083 SLC35A3Q9Y2D2 325 aa18.31■□□□□ 0.52
SS18-224ENST00000584083 EMC9Q9Y3B6 208 aa18.31■□□□□ 0.52
SS18-224ENST00000584083 FAM234BA2RU67 622 aa18.3■□□□□ 0.52
SS18-224ENST00000584083 PRAMEF27A3QJZ7 478 aa18.3■□□□□ 0.52
SS18-224ENST00000584083 A6NNC1 897 aa18.3■□□□□ 0.52
SS18-224ENST00000584083 NR2F1P10589 423 aa18.3■□□□□ 0.52
SS18-224ENST00000584083 PGCP20142 388 aa18.3■□□□□ 0.52
SS18-224ENST00000584083 C6orf10Q5SRN2 563 aa18.3■□□□□ 0.52
SS18-224ENST00000584083 MSANTD1Q6ZTZ1 278 aa18.3■□□□□ 0.52
SS18-224ENST00000584083 FAM214BQ7L5A3 538 aa18.3■□□□□ 0.52
SS18-224ENST00000584083 ZFP90Q8TF47 636 aa18.3■□□□□ 0.52
SS18-224ENST00000584083 TMEM234Q8WY98 164 aa18.3■□□□□ 0.52
SS18-224ENST00000584083 VPS33AQ96AX1 596 aa18.3■□□□□ 0.52
SS18-224ENST00000584083 ZNF524Q96C55 264 aa18.3■□□□□ 0.52
SS18-224ENST00000584083 REXO5Q96IC2 774 aaKnown RBP18.3■□□□□ 0.52
SS18-224ENST00000584083 QRSL1Q9H0R6 528 aaKnown RBP18.3■□□□□ 0.52
SS18-224ENST00000584083 RASSF1Q9NS23 344 aa18.3■□□□□ 0.52
SS18-224ENST00000584083 SLC6A13Q9NSD5 602 aa18.3■□□□□ 0.52
SS18-224ENST00000584083 PROCRQ9UNN8 238 aa18.3■□□□□ 0.52
SS18-224ENST00000584083 SPG11Q96JI7 2443 aa18.3■□□□□ 0.52
SS18-224ENST00000584083 NTN1O95631 604 aa18.29■□□□□ 0.52
SS18-224ENST00000584083 SLC7A1P30825 629 aa18.29■□□□□ 0.52
SS18-224ENST00000584083 PGM1P36871 562 aa18.29■□□□□ 0.52
SS18-224ENST00000584083 KCNJ5P48544 419 aa18.29■□□□□ 0.52
SS18-224ENST00000584083 AQP5P55064 265 aa18.29■□□□□ 0.52
SS18-224ENST00000584083 FAM27E3Q08E93 113 aa18.29■□□□□ 0.52
SS18-224ENST00000584083 SELENBP1Q13228 472 aa18.29■□□□□ 0.52
SS18-224ENST00000584083 DAZAP2Q15038 168 aaPredicted RBP18.29■□□□□ 0.52
SS18-224ENST00000584083 SLC25A53Q5H9E4 307 aa18.29■□□□□ 0.52
SS18-224ENST00000584083 GTF2IRD2BQ6EKJ0 949 aa18.29■□□□□ 0.52
SS18-224ENST00000584083 GTF2IRD2Q86UP8 949 aa18.29■□□□□ 0.52
SS18-224ENST00000584083 ZNF610Q8N9Z0 462 aa18.29■□□□□ 0.52
SS18-224ENST00000584083 ROBO4Q8WZ75 1007 aa18.29■□□□□ 0.52
SS18-224ENST00000584083 ST8SIA1Q92185 356 aa18.29■□□□□ 0.52
SS18-224ENST00000584083 GMPPAQ96IJ6 420 aaPredicted RBP18.29■□□□□ 0.52
SS18-224ENST00000584083 EBF4Q9BQW3 602 aa18.29■□□□□ 0.52
SS18-224ENST00000584083 SLC39A3Q9BRY0 314 aa18.29■□□□□ 0.52
SS18-224ENST00000584083 CCDC28BQ9BUN5 200 aa18.29■□□□□ 0.52
SS18-224ENST00000584083 CLEC4MQ9H2X3 399 aaPredicted RBP18.29■□□□□ 0.52
SS18-224ENST00000584083 NDRG3Q9UGV2 375 aa18.29■□□□□ 0.52
SS18-224ENST00000584083 SH3D21A4FU49 640 aa18.28■□□□□ 0.52
SS18-224ENST00000584083 CGAP01215 116 aa18.28■□□□□ 0.52
SS18-224ENST00000584083 CHRM4P08173 479 aa18.28■□□□□ 0.52
SS18-224ENST00000584083 ZCCHC18P0CG32 403 aa18.28■□□□□ 0.52
SS18-224ENST00000584083 CD8BP10966 210 aa18.28■□□□□ 0.52
SS18-224ENST00000584083 RYKP34925 604 aa18.28■□□□□ 0.52
SS18-224ENST00000584083 CD79BP40259 229 aa18.28■□□□□ 0.52
SS18-224ENST00000584083 CRATP43155 626 aa18.28■□□□□ 0.52
SS18-224ENST00000584083 SESN3P58005 492 aa18.28■□□□□ 0.52
SS18-224ENST00000584083 KCNJ10P78508 379 aa18.28■□□□□ 0.52
SS18-224ENST00000584083 GUSBP1Q15486 140 aa18.28■□□□□ 0.52
SS18-224ENST00000584083 AP1ARQ63HQ0 302 aa18.28■□□□□ 0.52
SS18-224ENST00000584083 ZNF474Q6S9Z5 364 aaPredicted RBP18.28■□□□□ 0.52
SS18-224ENST00000584083 LRRC74BQ6ZQY2 392 aa18.28■□□□□ 0.52
SS18-224ENST00000584083 ARFGAP2Q8N6H7 521 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms