RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 HOXC12P31275 282 aa18.73■□□□□ 0.59
CCDC42-203ENST00000581598 KCNJ5P48544 419 aa18.73■□□□□ 0.59
CCDC42-203ENST00000581598 CLDN8P56748 225 aa18.73■□□□□ 0.59
CCDC42-203ENST00000581598 ZNF117Q03924 483 aa18.73■□□□□ 0.59
CCDC42-203ENST00000581598 GABPB1Q06547 395 aaPredicted RBP18.73■□□□□ 0.59
CCDC42-203ENST00000581598 TP53BP2Q13625 1128 aa18.73■□□□□ 0.59
CCDC42-203ENST00000581598 KRTAP21-3Q3LHN1 58 aa18.73■□□□□ 0.59
CCDC42-203ENST00000581598 DCST2Q5T1A1 773 aa18.73■□□□□ 0.59
CCDC42-203ENST00000581598 BHLHB9Q6PI77 547 aa18.73■□□□□ 0.59
CCDC42-203ENST00000581598 MARK4Q96L34 752 aa18.73■□□□□ 0.59
CCDC42-203ENST00000581598 KLHDC3Q9BQ90 382 aa18.73■□□□□ 0.59
CCDC42-203ENST00000581598 NMUR2Q9GZQ4 415 aa18.73■□□□□ 0.59
CCDC42-203ENST00000581598 MYLK2Q9H1R3 596 aa18.73■□□□□ 0.59
CCDC42-203ENST00000581598 SAR1AQ9NR31 198 aa18.73■□□□□ 0.59
CCDC42-203ENST00000581598 SDR39U1Q9NRG7 319 aaPredicted RBP18.73■□□□□ 0.59
CCDC42-203ENST00000581598 ICAM5Q9UMF0 924 aa18.73■□□□□ 0.59
CCDC42-203ENST00000581598 A0A0J9YW62 118 aa18.72■□□□□ 0.59
CCDC42-203ENST00000581598 H3BNH8 94 aa18.72■□□□□ 0.59
CCDC42-203ENST00000581598 ANKRD28O15084 1053 aa18.72■□□□□ 0.59
CCDC42-203ENST00000581598 CXCL13O43927 109 aa18.72■□□□□ 0.59
CCDC42-203ENST00000581598 CCDC22O60826 627 aa18.72■□□□□ 0.59
CCDC42-203ENST00000581598 SYNGR4O95473 234 aa18.72■□□□□ 0.59
CCDC42-203ENST00000581598 G6PDP11413 515 aa18.72■□□□□ 0.59
CCDC42-203ENST00000581598 NID1P14543 1247 aa18.72■□□□□ 0.59
CCDC42-203ENST00000581598 P2RX1P51575 399 aa18.72■□□□□ 0.59
CCDC42-203ENST00000581598 ATP12AP54707 1039 aa18.72■□□□□ 0.59
CCDC42-203ENST00000581598 CTBP2P56545 445 aa18.72■□□□□ 0.59
CCDC42-203ENST00000581598 SQLEQ14534 574 aa18.72■□□□□ 0.59
CCDC42-203ENST00000581598 SPDYE7PQ495Y7 208 aa18.72■□□□□ 0.59
CCDC42-203ENST00000581598 PDCD4Q53EL6 469 aaKnown RBP18.72■□□□□ 0.59
CCDC42-203ENST00000581598 PHOSPHO1Q8TCT1 267 aa18.72■□□□□ 0.59
CCDC42-203ENST00000581598 KLHL15Q96M94 604 aa18.72■□□□□ 0.59
CCDC42-203ENST00000581598 PIP5K1AQ99755 562 aa18.72■□□□□ 0.59
CCDC42-203ENST00000581598 MRGBPQ9NV56 204 aa18.72■□□□□ 0.59
CCDC42-203ENST00000581598 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.72■□□□□ 0.59
CCDC42-203ENST00000581598 C6orf203Q9P0P8 240 aaPredicted RBP18.72■□□□□ 0.59
CCDC42-203ENST00000581598 MAP1AP78559 2803 aaPredicted RBP18.72■□□□□ 0.59
CCDC42-203ENST00000581598 FLNAP21333 2647 aaKnown RBP18.71■□□□□ 0.59
CCDC42-203ENST00000581598 RAI1Q7Z5J4 1906 aaPredicted RBP18.71■□□□□ 0.59
CCDC42-203ENST00000581598 TNFSF11O14788 317 aa18.71■□□□□ 0.59
CCDC42-203ENST00000581598 DCTN3O75935 186 aa18.71■□□□□ 0.59
CCDC42-203ENST00000581598 PLGP00747 810 aaPredicted RBP18.71■□□□□ 0.59
CCDC42-203ENST00000581598 PPP3CBP16298 524 aa18.71■□□□□ 0.59
CCDC42-203ENST00000581598 NCF2P19878 526 aaPredicted RBP18.71■□□□□ 0.59
CCDC42-203ENST00000581598 HBA1P69905 142 aa18.71■□□□□ 0.59
CCDC42-203ENST00000581598 HBMQ6B0K9 141 aa18.71■□□□□ 0.59
CCDC42-203ENST00000581598 GTF2IRD2BQ6EKJ0 949 aa18.71■□□□□ 0.59
CCDC42-203ENST00000581598 MTDHQ86UE4 582 aaKnown RBP18.71■□□□□ 0.59
CCDC42-203ENST00000581598 GTF2IRD2Q86UP8 949 aa18.71■□□□□ 0.59
CCDC42-203ENST00000581598 CXorf67Q86X51 503 aaPredicted RBP18.71■□□□□ 0.59
CCDC42-203ENST00000581598 LILRA2Q8N149 483 aa18.71■□□□□ 0.59
CCDC42-203ENST00000581598 NUDT8Q8WV74 236 aa18.71■□□□□ 0.59
CCDC42-203ENST00000581598 OR7D2Q96RA2 312 aa18.71■□□□□ 0.59
CCDC42-203ENST00000581598 FANCFQ9NPI8 374 aa18.71■□□□□ 0.59
CCDC42-203ENST00000581598 GPC6Q9Y625 555 aaPredicted RBP18.71■□□□□ 0.59
CCDC42-203ENST00000581598 KCNE3Q9Y6H6 103 aa18.71■□□□□ 0.59
CCDC42-203ENST00000581598 DUXAA6NLW8 204 aa18.7■□□□□ 0.58
CCDC42-203ENST00000581598 AK1P00568 194 aa18.7■□□□□ 0.58
CCDC42-203ENST00000581598 PABPC4LP0CB38 370 aaKnown RBP18.7■□□□□ 0.58
CCDC42-203ENST00000581598 ADSLP30566 484 aaPredicted RBP18.7■□□□□ 0.58
CCDC42-203ENST00000581598 FOXF1Q12946 379 aa18.7■□□□□ 0.58
CCDC42-203ENST00000581598 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.7■□□□□ 0.58
CCDC42-203ENST00000581598 CBLN3Q6UW01 205 aa18.7■□□□□ 0.58
CCDC42-203ENST00000581598 HEATR5AQ86XA9 2040 aa18.7■□□□□ 0.58
CCDC42-203ENST00000581598 OSTF1Q92882 214 aa18.7■□□□□ 0.58
CCDC42-203ENST00000581598 ARSGQ96EG1 525 aa18.7■□□□□ 0.58
CCDC42-203ENST00000581598 SDF2Q99470 211 aa18.7■□□□□ 0.58
CCDC42-203ENST00000581598 OR10A4Q9H209 315 aa18.7■□□□□ 0.58
CCDC42-203ENST00000581598 TMEM45AQ9NWC5 275 aa18.7■□□□□ 0.58
CCDC42-203ENST00000581598 ZIM2Q9NZV7 527 aa18.7■□□□□ 0.58
CCDC42-203ENST00000581598 DTNAQ9Y4J8 743 aa18.7■□□□□ 0.58
CCDC42-203ENST00000581598 GJE1A6NN92 205 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 ETV2O00321 342 aaPredicted RBP18.69■□□□□ 0.58
CCDC42-203ENST00000581598 RNASET2O00584 256 aaKnown RBP18.69■□□□□ 0.58
CCDC42-203ENST00000581598 SLC22A2O15244 555 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 CFLARO15519 480 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 EIF4E2O60573 245 aaKnown RBP18.69■□□□□ 0.58
CCDC42-203ENST00000581598 OPN1LWP04000 364 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 LOXP28300 417 aaPredicted RBP18.69■□□□□ 0.58
CCDC42-203ENST00000581598 CARD18P57730 90 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 STX1BP61266 288 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 SLC25A53Q5H9E4 307 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 SHEQ5VZ18 495 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 FAM91A1Q658Y4 838 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 PPP4R4Q6NUP7 873 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 BEND4Q6ZU67 534 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 ZNF550Q7Z398 422 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 KRTAP1-3Q8IUG1 177 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 LRRC75A-AS1Q8N1F1 130 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 MIER2Q8N344 545 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 TOR1AIP2Q8NFQ8 470 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 OR8J2Q8NGG1 315 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 GPR119Q8TDV5 335 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 PIGTQ969N2 578 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 CPNE4Q96A23 557 aaPredicted RBP18.69■□□□□ 0.58
CCDC42-203ENST00000581598 PIK3IP1Q96FE7 263 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 POM121Q96HA1 1249 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 TMEM185BQ9H7F4 350 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 GP6Q9HCN6 339 aa18.69■□□□□ 0.58
CCDC42-203ENST00000581598 TIGARQ9NQ88 270 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms