RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 C10orf111Q8N326 155 aa11.26□□□□□ -0.61
CBX1-206ENST00000581003 ZNF610Q8N9Z0 462 aa11.26□□□□□ -0.61
CBX1-206ENST00000581003 FAM71CQ8NEG0 241 aa11.26□□□□□ -0.61
CBX1-206ENST00000581003 ZFP90Q8TF47 636 aa11.26□□□□□ -0.61
CBX1-206ENST00000581003 ABHD3Q8WU67 409 aa11.26□□□□□ -0.61
CBX1-206ENST00000581003 CNOT9Q92600 299 aaKnown RBP11.26□□□□□ -0.61
CBX1-206ENST00000581003 KLHL15Q96M94 604 aa11.26□□□□□ -0.61
CBX1-206ENST00000581003 ZFP3Q96NJ6 502 aa11.26□□□□□ -0.61
CBX1-206ENST00000581003 TCF7L2Q9NQB0 619 aa11.26□□□□□ -0.61
CBX1-206ENST00000581003 EXD2Q9NVH0 621 aa11.26□□□□□ -0.61
CBX1-206ENST00000581003 DNAJB12Q9NXW2 375 aaKnown RBP11.26□□□□□ -0.61
CBX1-206ENST00000581003 ZIM2Q9NZV7 527 aa11.26□□□□□ -0.61
CBX1-206ENST00000581003 NUP214P35658 2090 aaPredicted RBP11.25□□□□□ -0.61
CBX1-206ENST00000581003 TUBAL3A6NHL2 446 aa11.25□□□□□ -0.61
CBX1-206ENST00000581003 A6NNC1 897 aa11.25□□□□□ -0.61
CBX1-206ENST00000581003 SIAH2O43255 324 aa11.25□□□□□ -0.61
CBX1-206ENST00000581003 AK1P00568 194 aa11.25□□□□□ -0.61
CBX1-206ENST00000581003 NUDT7P0C024 238 aa11.25□□□□□ -0.61
CBX1-206ENST00000581003 HOXB9P17482 250 aaPredicted RBP11.25□□□□□ -0.61
CBX1-206ENST00000581003 CAPN3P20807 821 aa11.25□□□□□ -0.61
CBX1-206ENST00000581003 RYKP34925 604 aa11.25□□□□□ -0.61
CBX1-206ENST00000581003 SUMO3P55854 103 aaPredicted RBP11.25□□□□□ -0.61
CBX1-206ENST00000581003 EEFSECP57772 596 aaKnown RBP11.25□□□□□ -0.61
CBX1-206ENST00000581003 RPS3AP61247 264 aaKnown RBP11.25□□□□□ -0.61
CBX1-206ENST00000581003 ZNF239Q16600 458 aaKnown RBP11.25□□□□□ -0.61
CBX1-206ENST00000581003 GSTA3Q16772 222 aa11.25□□□□□ -0.61
CBX1-206ENST00000581003 EXOC3L2Q2M3D2 409 aa11.25□□□□□ -0.61
CBX1-206ENST00000581003 TMEM176BQ3YBM2 270 aaPredicted RBP11.25□□□□□ -0.61
CBX1-206ENST00000581003 C6orf10Q5SRN2 563 aa11.25□□□□□ -0.61
CBX1-206ENST00000581003 ATAD3BQ5T9A4 648 aa11.25□□□□□ -0.61
CBX1-206ENST00000581003 ANKRD34AQ69YU3 496 aa11.25□□□□□ -0.61
CBX1-206ENST00000581003 OR2A2Q6IF42 318 aa11.25□□□□□ -0.61
CBX1-206ENST00000581003 ZNF550Q7Z398 422 aa11.25□□□□□ -0.61
CBX1-206ENST00000581003 MED12LQ86YW9 2145 aa11.25□□□□□ -0.61
CBX1-206ENST00000581003 MSRB3Q8IXL7 192 aa11.25□□□□□ -0.61
CBX1-206ENST00000581003 MIER2Q8N344 545 aa11.25□□□□□ -0.61
CBX1-206ENST00000581003 TOR1AIP2Q8NFQ8 470 aa11.25□□□□□ -0.61
CBX1-206ENST00000581003 DYDC1Q8WWB3 177 aa11.25□□□□□ -0.61
CBX1-206ENST00000581003 OSTF1Q92882 214 aa11.25□□□□□ -0.61
CBX1-206ENST00000581003 PAIP1Q9H074 479 aaKnown RBP11.25□□□□□ -0.61
CBX1-206ENST00000581003 SAP130Q9H0E3 1048 aa11.25□□□□□ -0.61
CBX1-206ENST00000581003 RASSF1Q9NS23 344 aa11.25□□□□□ -0.61
CBX1-206ENST00000581003 INTS9Q9NV88 658 aaKnown RBP11.25□□□□□ -0.61
CBX1-206ENST00000581003 KLHL28Q9NXS3 571 aa11.25□□□□□ -0.61
CBX1-206ENST00000581003 SLAMF8Q9P0V8 285 aa11.25□□□□□ -0.61
CBX1-206ENST00000581003 FAM221AA4D161 298 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 HMGB1P1B2RPK0 211 aaPredicted RBP11.24□□□□□ -0.61
CBX1-206ENST00000581003 NR5A2O00482 541 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 POLR3GO15318 223 aaPredicted RBP11.24□□□□□ -0.61
CBX1-206ENST00000581003 EIF4E2O60573 245 aaKnown RBP11.24□□□□□ -0.61
CBX1-206ENST00000581003 DNAJA2O60884 412 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 IL6P05231 212 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 ENPP1P22413 925 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 ME2P23368 584 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 EDNRAP25101 427 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 ELK4P28324 431 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 SESN3P58005 492 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 SORDQ00796 357 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 SF3A3Q12874 501 aaKnown RBP eCLIP11.24□□□□□ -0.61
CBX1-206ENST00000581003 CBFBQ13951 182 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 PAGE3Q5JUK9 113 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 ESPNLQ6ZVH7 1005 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 EIF3MQ7L2H7 374 aaKnown RBP11.24□□□□□ -0.61
CBX1-206ENST00000581003 FAM214BQ7L5A3 538 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 VRK2Q86Y07 508 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 CDC20BQ86Y33 519 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 GLB1L3Q8NCI6 653 aaPredicted RBP11.24□□□□□ -0.61
CBX1-206ENST00000581003 FAM222BQ8WU58 562 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 CKAP2Q8WWK9 683 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 GTF2H4Q92759 462 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 MAL2Q969L2 176 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 RSPO3Q9BXY4 272 aaPredicted RBP11.24□□□□□ -0.61
CBX1-206ENST00000581003 POLDIP3Q9BY77 421 aaKnown RBP11.24□□□□□ -0.61
CBX1-206ENST00000581003 PRRG4Q9BZD6 226 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 LAT2Q9GZY6 243 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 CLEC4MQ9H2X3 399 aaPredicted RBP11.24□□□□□ -0.61
CBX1-206ENST00000581003 ACBD3Q9H3P7 528 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 PIGMQ9H3S5 423 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 C12orf49Q9H741 205 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 VIPAS39Q9H9C1 493 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 SLC52A3Q9NQ40 469 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 RLIMQ9NVW2 624 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 SLC25A37Q9NYZ2 338 aa11.24□□□□□ -0.61
CBX1-206ENST00000581003 GPC6Q9Y625 555 aaPredicted RBP11.24□□□□□ -0.61
CBX1-206ENST00000581003 FAM234BA2RU67 622 aa11.23□□□□□ -0.61
CBX1-206ENST00000581003 SH3D21A4FU49 640 aa11.23□□□□□ -0.61
CBX1-206ENST00000581003 AGAP5A6NIR3 686 aa11.23□□□□□ -0.61
CBX1-206ENST00000581003 ETV2O00321 342 aaPredicted RBP11.23□□□□□ -0.61
CBX1-206ENST00000581003 MSTNO14793 375 aa11.23□□□□□ -0.61
CBX1-206ENST00000581003 SS18L1O75177 396 aaPredicted RBP11.23□□□□□ -0.61
CBX1-206ENST00000581003 SYNGR4O95473 234 aa11.23□□□□□ -0.61
CBX1-206ENST00000581003 BCHEP06276 602 aa11.23□□□□□ -0.61
CBX1-206ENST00000581003 CCNA2P20248 432 aa11.23□□□□□ -0.61
CBX1-206ENST00000581003 RPS4Y1P22090 263 aaKnown RBP11.23□□□□□ -0.61
CBX1-206ENST00000581003 AGTR1P30556 359 aa11.23□□□□□ -0.61
CBX1-206ENST00000581003 DNAJA1P31689 397 aaKnown RBP11.23□□□□□ -0.61
CBX1-206ENST00000581003 EIF1P41567 113 aaKnown RBP11.23□□□□□ -0.61
CBX1-206ENST00000581003 CRATP43155 626 aa11.23□□□□□ -0.61
CBX1-206ENST00000581003 CARD18P57730 90 aa11.23□□□□□ -0.61
CBX1-206ENST00000581003 HPCAP84074 193 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms