RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 FOXF1Q12946 379 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 FOXF2Q12947 444 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 SNTB1Q13884 538 aaKnown RBP5.9□□□□□ -1.46
TRAF4-213ENST00000578917 FGFBP1Q14512 234 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 SQLEQ14534 574 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 LARS2Q15031 903 aaKnown RBP5.9□□□□□ -1.46
TRAF4-213ENST00000578917 QPRTQ15274 297 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 TOMM34Q15785 309 aaPredicted RBP5.9□□□□□ -1.46
TRAF4-213ENST00000578917 MAPK14Q16539 360 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 EXOC3L2Q2M3D2 409 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 PLPPR5Q32ZL2 321 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 METTL21CQ5VZV1 264 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 TYW3Q6IPR3 259 aaKnown RBP5.9□□□□□ -1.46
TRAF4-213ENST00000578917 LRRC74BQ6ZQY2 392 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 ESPNLQ6ZVH7 1005 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 TMEM200AQ86VY9 491 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 NAXEQ8NCW5 288 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 OR52P1PQ8NH57 321 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 OR10D3Q8NH80 312 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 OR2V1Q8NHB1 315 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 FNDC9Q8TBE3 224 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 ZFP90Q8TF47 636 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 FIG4Q92562 907 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 GTF2H4Q92759 462 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 PMM1Q92871 262 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 RNASE6Q93091 150 aaKnown RBP5.9□□□□□ -1.46
TRAF4-213ENST00000578917 ZG16BQ96DA0 208 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 ZNF845Q96IR2 970 aaPredicted RBP5.9□□□□□ -1.46
TRAF4-213ENST00000578917 MRGPRX4Q96LA9 322 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 KLHL15Q96M94 604 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 RBM24Q9BX46 236 aaKnown RBP5.9□□□□□ -1.46
TRAF4-213ENST00000578917 TRIM8Q9BZR9 551 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 ZNF350Q9GZX5 532 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 ENKD1Q9H0I2 346 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 QRSL1Q9H0R6 528 aaKnown RBP5.9□□□□□ -1.46
TRAF4-213ENST00000578917 PIGMQ9H3S5 423 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 FANCFQ9NPI8 374 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 SLC6A13Q9NSD5 602 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 NDRG3Q9UGV2 375 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 FOXD3Q9UJU5 478 aaPredicted RBP5.9□□□□□ -1.46
TRAF4-213ENST00000578917 ICAM5Q9UMF0 924 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 NDUFAF1Q9Y375 327 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 EMC9Q9Y3B6 208 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 ZNF175Q9Y473 711 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 PCDHB14Q9Y5E9 798 aa5.9□□□□□ -1.46
TRAF4-213ENST00000578917 SPIN1Q9Y657 262 aaPredicted RBP5.9□□□□□ -1.46
TRAF4-213ENST00000578917 CCDC168Q8NDH2 2452 aa5.9□□□□□ -1.47
TRAF4-213ENST00000578917 ANKHD1Q8IWZ3 2542 aaKnown RBP5.9□□□□□ -1.47
TRAF4-213ENST00000578917 SPG11Q96JI7 2443 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 A0A0G2JPF8 293 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 A0A1W2PNV4 684 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 A0A1W2PP18 115 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 AGAP5A6NIR3 686 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 CLDN24A6NM45 220 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 HNRNPCL2B2RXH8 293 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 HNRNPCL3B7ZW38 293 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 NPIPB9F8W1W9 429 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 ADAMDEC1O15204 470 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 HNRNPCL1O60812 293 aaKnown RBP5.89□□□□□ -1.47
TRAF4-213ENST00000578917 C1QCP02747 245 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 BCHEP06276 602 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 CRHP06850 196 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 CHRM4P08173 479 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 GUSBP08236 651 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 TFPTP0C1Z6 253 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 HNRNPCL4P0DMR1 293 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 PRKCAP17252 672 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 IL11P20809 199 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 SLC6A2P23975 617 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 ELK4P28324 431 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 APOBEC1P41238 236 aaKnown RBP5.89□□□□□ -1.47
TRAF4-213ENST00000578917 SLC6A8P48029 635 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 IDH2P48735 452 aaKnown RBP5.89□□□□□ -1.47
TRAF4-213ENST00000578917 ATP4BP51164 291 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 SKP2Q13309 424 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 RGNQ15493 299 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 TMEM44Q2T9K0 475 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 MMEL1Q495T6 779 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 GTDC1Q4AE62 458 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 ZNF311Q5JNZ3 666 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 FRRS1Q6ZNA5 592 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 STK32CQ86UX6 486 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 KRT73Q86Y46 540 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 DMRTC2Q8IXT2 367 aaPredicted RBP5.89□□□□□ -1.47
TRAF4-213ENST00000578917 CMIPQ8IY22 773 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 ZZZ3Q8IYH5 903 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 ZNF440Q8IYI8 595 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 METTL25Q8N6Q8 603 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 SLC38A5Q8WUX1 472 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 WDR60Q8WVS4 1066 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 OIT3Q8WWZ8 545 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 ROBO4Q8WZ75 1007 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 ST8SIA1Q92185 356 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 ARSGQ96EG1 525 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 OR5B2Q96R09 309 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 UCN2Q96RP3 112 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 NPAS1Q99742 590 aa5.89□□□□□ -1.47
TRAF4-213ENST00000578917 TREX2Q9BQ50 279 aaPredicted RBP5.89□□□□□ -1.47
TRAF4-213ENST00000578917 TMEM120AQ9BXJ8 343 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms