RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 FGF5P12034 268 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 PRG2P13727 222 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 NAGAP17050 411 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 PGCP20142 388 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 PCSK6P29122 969 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 C21orf33P30042 268 aaPredicted RBP10.24□□□□□ -0.77
SKA2-204ENST00000578519 CDH11P55287 796 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 EFNB1P98172 346 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 LGALS3BPQ08380 585 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 PLCXD2Q0VAA5 305 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 SPHARQ15513 63 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 ELOA3BQ3SY89 546 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 SYT14P1Q58G82 188 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 VWA2Q5GFL6 755 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 ARHGAP11AQ6P4F7 1023 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 HSDL2Q6YN16 418 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 ZNF574Q6ZN55 896 aaPredicted RBP10.24□□□□□ -0.77
SKA2-204ENST00000578519 SLC46A3Q7Z3Q1 461 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 OAFQ86UD1 273 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 IQCF1Q8N6M8 205 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 AMER2Q8N7J2 671 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 PSD4Q8NDX1 1056 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 ELOA3Q8NG57 546 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 OR8K3Q8NH51 312 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 ZNF563Q8TA94 476 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 GRHL3Q8TE85 626 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.24□□□□□ -0.77
SKA2-204ENST00000578519 TSLPQ969D9 159 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 ADIPOR1Q96A54 375 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 LGALS12Q96DT0 336 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 ZHX1-C8orf76Q96EF9 292 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 RNFT2Q96EX2 444 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 SAMD8Q96LT4 415 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 GAL3ST4Q96RP7 486 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 LPAR4Q99677 370 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 GPA33Q99795 319 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 IFT27Q9BW83 186 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 NUDT9Q9BW91 350 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 GTPBP2Q9BX10 602 aaKnown RBP10.24□□□□□ -0.77
SKA2-204ENST00000578519 DPH1Q9BZG8 443 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 TBL1XR1Q9BZK7 514 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 NXF5Q9H1B4 397 aaKnown RBP10.24□□□□□ -0.77
SKA2-204ENST00000578519 UBQLN3Q9H347 655 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 DSN1Q9H410 356 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 SIAEQ9HAT2 523 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 WDR70Q9NW82 654 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 ICAM5Q9UMF0 924 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 NTNG1Q9Y2I2 539 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 THADAQ6YHU6 1953 aa10.24□□□□□ -0.77
SKA2-204ENST00000578519 CACNA1IQ9P0X4 2223 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 A0A087WUJ7 227 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 CENPVL1A0A0U1RR11 272 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 A0A1W2PQM1 296 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 SLC22A31A6NKX4 558 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 PRR23D1E9PI22 279 aaPredicted RBP10.23□□□□□ -0.77
SKA2-204ENST00000578519 NDUFB5O43674 189 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 CPNE3O75131 537 aaKnown RBP10.23□□□□□ -0.77
SKA2-204ENST00000578519 NDUFB2O95178 105 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 LYPD3O95274 346 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 CLPSP04118 112 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 THY1P04216 161 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 HIST1H2ABP04908 130 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 IGFBP1P08833 259 aaPredicted RBP10.23□□□□□ -0.77
SKA2-204ENST00000578519 HSMCR30P0CW71 290 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 PRR23D2P0DMB1 279 aaPredicted RBP10.23□□□□□ -0.77
SKA2-204ENST00000578519 MYF5P13349 255 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 ZNF3P17036 446 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 FUT4P22083 530 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 PSMA1P25786 263 aaKnown RBP10.23□□□□□ -0.77
SKA2-204ENST00000578519 NOS3P29474 1203 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 HTR1FP30939 366 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 SOX6P35712 828 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 TMED10P49755 219 aaKnown RBP10.23□□□□□ -0.77
SKA2-204ENST00000578519 RGS6P49758 472 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 NR0B1P51843 470 aaKnown RBP10.23□□□□□ -0.77
SKA2-204ENST00000578519 PRPS1P60891 318 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 POU4F2Q12837 409 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 EBPQ15125 230 aaKnown RBP10.23□□□□□ -0.77
SKA2-204ENST00000578519 CLEC12AQ5QGZ9 265 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 LINC00114Q6XXX2 140 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 TMPRSS11AQ6ZMR5 421 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 HIST3H2AQ7L7L0 130 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 CXXC5Q7LFL8 322 aaKnown RBP10.23□□□□□ -0.77
SKA2-204ENST00000578519 ZAR1Q86SH2 424 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 MAML2Q8IZL2 1156 aaPredicted RBP10.23□□□□□ -0.77
SKA2-204ENST00000578519 LNX2Q8N448 690 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 TMCO5AQ8N6Q1 288 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 NANOGP1Q8N7R0 232 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 POGLUT1Q8NBL1 392 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 OR4C3Q8NH37 302 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 NUBPLQ8TB37 319 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 HIST1H2ACQ93077 130 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 BORCS5Q969J3 196 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 EFHD2Q96C19 240 aaPredicted RBP10.23□□□□□ -0.77
SKA2-204ENST00000578519 TMCO6Q96DC7 493 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 VMP1Q96GC9 406 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 TMEM43Q9BTV4 400 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 WWTR1Q9GZV5 400 aa10.23□□□□□ -0.77
SKA2-204ENST00000578519 NAA50Q9GZZ1 169 aaKnown RBP10.23□□□□□ -0.77
SKA2-204ENST00000578519 SLC26A1Q9H2B4 701 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms