RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 ADAM10O14672 748 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 MGRN1O60291 552 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 ICOSLGO75144 302 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 ZNF682O95780 498 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 EPPINO95925 133 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 RAP2AP10114 183 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 NAT1P18440 290 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 PSMA4P25789 261 aaKnown RBP7.32□□□□□ -1.24
COPS3-215ENST00000578317 SOX3P41225 446 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 MAGEA2P43356 314 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 RFX3P48380 749 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 GAS1P54826 345 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 FBXW4P57775 412 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 CHRNB3Q05901 458 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 MFAP5Q13361 173 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 IQCCQ4KMZ1 466 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 IFI44LQ53G44 452 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 EIPR1Q53HC9 387 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 PDZK1Q5T2W1 519 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 SFRP5Q5T4F7 317 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 SLC22A10Q63ZE4 541 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 B3GNTL1Q67FW5 361 aaPredicted RBP7.32□□□□□ -1.24
COPS3-215ENST00000578317 FCRLBQ6BAA4 426 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 ENPP6Q6UWR7 440 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 FKBP9P1Q75LS8 142 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 GALNT10Q86SR1 603 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 CLIP4Q8N3C7 705 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 FAM71CQ8NEG0 241 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 GEMIN6Q8WXD5 167 aaKnown RBP7.32□□□□□ -1.24
COPS3-215ENST00000578317 PROX1Q92786 737 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 SLCO4A1Q96BD0 722 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 SMAD5Q99717 465 aaKnown RBP7.32□□□□□ -1.24
COPS3-215ENST00000578317 ARHGDIGQ99819 225 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 CHID1Q9BWS9 393 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 YY1AP1Q9H869 796 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 CPNE5Q9HCH3 593 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 S100A14Q9HCY8 104 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 EXOSC3Q9NQT5 275 aaKnown RBP7.32□□□□□ -1.24
COPS3-215ENST00000578317 HPF1Q9NWY4 346 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 RAXQ9Y2V3 346 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 AP4S1Q9Y587 144 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 PCDHGA9Q9Y5G4 932 aaKnown RBP7.32□□□□□ -1.24
COPS3-215ENST00000578317 CHCHD2Q9Y6H1 151 aaPredicted RBP7.32□□□□□ -1.24
COPS3-215ENST00000578317 SCN2AQ99250 2005 aa7.32□□□□□ -1.24
COPS3-215ENST00000578317 IGLV3-32A0A0A0MS00 114 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 CENPVL1A0A0U1RR11 272 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 HNRNPRO43390 633 aaKnown RBP7.31□□□□□ -1.24
COPS3-215ENST00000578317 EIF4E2O60573 245 aaKnown RBP7.31□□□□□ -1.24
COPS3-215ENST00000578317 FMO6PO60774 539 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 NEURL1O76050 574 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 SNX4O95219 450 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 OPN1SWP03999 348 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 C1QTNF9P0C862 333 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 ITGA2P17301 1181 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 EVI2BP34910 448 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 CD96P40200 585 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 CASP3P42574 277 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 CCL11P51671 97 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 TMPRSS3P57727 454 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 C17orf67Q0P5P2 114 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 NRF1Q16656 503 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 GLIPR1L2Q4G1C9 344 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 MRPL2Q5T653 305 aaKnown RBP7.31□□□□□ -1.24
COPS3-215ENST00000578317 SLC30A6Q6NXT4 461 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 IL20RBQ6UXL0 311 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 RTL4Q6ZR62 310 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 ZNF550Q7Z398 422 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 VTCN1Q7Z7D3 282 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 ZNF440Q8IYI8 595 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 BEST3Q8N1M1 668 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 FAM86B1Q8N7N1 296 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 FDCSPQ8NFU4 85 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 OR10G3Q8NGC4 313 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 GRHL3Q8TE85 626 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 RSRC1Q96IZ7 334 aaKnown RBP7.31□□□□□ -1.24
COPS3-215ENST00000578317 TPD52L3Q96J77 140 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 NODALQ96S42 347 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 ZNF347Q96SE7 839 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 UTP23Q9BRU9 249 aaKnown RBP7.31□□□□□ -1.24
COPS3-215ENST00000578317 ANGPTL4Q9BY76 406 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 TBL1XR1Q9BZK7 514 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 LAT2Q9GZY6 243 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 DCLRE1BQ9H816 532 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 SDHAF3Q9NRP4 125 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 RLIMQ9NVW2 624 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 GPR83Q9NYM4 423 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 FLRT3Q9NZU0 649 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 NDUFAF4Q9P032 175 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 LRFN1Q9P244 771 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 SLC13A4Q9UKG4 626 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 CNOT11Q9UKZ1 510 aaKnown RBP7.31□□□□□ -1.24
COPS3-215ENST00000578317 SLC9A8Q9Y2E8 581 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 SH3GLB1Q9Y371 365 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 MGAQ8IWI9 3026 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 PCSK5Q92824 1860 aa7.31□□□□□ -1.24
COPS3-215ENST00000578317 NPIPA5A0A0B4J1W7 369 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 PRAMEF25A6NGN4 478 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 CLDN24A6NM45 220 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 NPIPA7E9PJI5 369 aa7.3□□□□□ -1.24
COPS3-215ENST00000578317 H3BNX3 289 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms