RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, human

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC57-211	ENST00000578187	SLAMF8	Q9P0V8	285 aa		11.52	□□□□□ -0.57
CCDC57-211	ENST00000578187	LEF1	Q9UJU2	399 aa	Predicted RBP	11.52	□□□□□ -0.57
CCDC57-211	ENST00000578187	VDAC3	Q9Y277	283 aa		11.52	□□□□□ -0.57
CCDC57-211	ENST00000578187	CARD8	Q9Y2G2	431 aa		11.52	□□□□□ -0.57
CCDC57-211	ENST00000578187	DSPP	Q9NZW4	1301 aa		11.52	□□□□□ -0.57
CCDC57-211	ENST00000578187	CELSR1	Q9NYQ6	3014 aa		11.52	□□□□□ -0.57
CCDC57-211	ENST00000578187	CLIC1	O00299	241 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	ZNF264	O43296	627 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	GMFG	O60234	142 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	EIF4E2	O60573	245 aa	Known RBP	11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	DNAJA2	O60884	412 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	GOSR1	O95249	250 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	TFPT	P0C1Z6	253 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	LINGO3	P0C6S8	592 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	PEPD	P12955	493 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	RPS4Y1	P22090	263 aa	Known RBP	11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	PPIB	P23284	216 aa	Known RBP	11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	PSMA4	P25789	261 aa	Known RBP	11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	CRAT	P43155	626 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	CPA2	P48052	419 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	RNF144A	P50876	292 aa	Predicted RBP	11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	P2RX1	P51575	399 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	ZNF136	P52737	540 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	IST1	P53990	364 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	SORD	Q00796	357 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	SKP2	Q13309	424 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	SNTB1	Q13884	538 aa	Known RBP	11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	RGN	Q15493	299 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	NDUFAF6	Q330K2	333 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	DLEU7	Q6UYE1	221 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	CHMP1B	Q7LBR1	199 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	ADGRE4P	Q86SQ3	457 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	RETREG3	Q86VR2	466 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	DPP10	Q8N608	796 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	PMM1	Q92871	262 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	ARSG	Q96EG1	525 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	CPPED1	Q9BRF8	314 aa	Predicted RBP	11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	SFXN3	Q9BWM7	321 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	SAR1A	Q9NR31	198 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	ST6GALNAC2	Q9UJ37	374 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	SLC35A3	Q9Y2D2	325 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	NDUFAF1	Q9Y375	327 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	MED12L	Q86YW9	2145 aa		11.51	□□□□□ -0.57
CCDC57-211	ENST00000578187	INTS1	Q8N201	2190 aa	Known RBP	11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	AGAP5	A6NIR3	686 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	KDM4E	B2RXH2	506 aa	Predicted RBP	11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	ANGPT2	O15123	496 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	BCHE	P06276	602 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	NR2F1	P10589	423 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	EPX	P11678	715 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	ADSL	P30566	484 aa	Predicted RBP	11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	PGM1	P36871	562 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	STAR	P49675	285 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	ZNF41	P51814	821 aa	Predicted RBP	11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	PLAUR	Q03405	335 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	SRY	Q05066	204 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	SF3A3	Q12874	501 aa	Known RBP eCLIP	11.5	□□□□□ -0.57	2e-6	■■■■■ 30.7
CCDC57-211	ENST00000578187	EIF3M	Q7L2H7	374 aa	Known RBP	11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	DHDDS	Q86SQ9	333 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	OR5M1	Q8NGP8	315 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	POC1B	Q8TC44	478 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	SLC38A5	Q8WUX1	472 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	NRGN	Q92686	78 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	ZG16B	Q96DA0	208 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	UCN2	Q96RP3	112 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	NPAS1	Q99742	590 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	TUBA1C	Q9BQE3	449 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	LAT2	Q9GZY6	243 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	QRSL1	Q9H0R6	528 aa	Known RBP	11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	IKZF5	Q9H5V7	419 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	A4GALT	Q9NPC4	353 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	CCM2L	Q9NUG4	571 aa	Predicted RBP	11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	CALML5	Q9NZT1	146 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	ZNF337	Q9Y3M9	751 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	AP4B1	Q9Y6B7	739 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	AKAP9	Q99996	3911 aa		11.5	□□□□□ -0.57
CCDC57-211	ENST00000578187	FAM221A	A4D161	298 aa		11.49	□□□□□ -0.57
CCDC57-211	ENST00000578187	SHISA8	B8ZZ34	492 aa		11.49	□□□□□ -0.57
CCDC57-211	ENST00000578187		H3BML4	177 aa		11.49	□□□□□ -0.57
CCDC57-211	ENST00000578187	GTPBP1	O00178	669 aa	Known RBP	11.49	□□□□□ -0.57
CCDC57-211	ENST00000578187	ETV2	O00321	342 aa	Predicted RBP	11.49	□□□□□ -0.57
CCDC57-211	ENST00000578187	SLC22A2	O15244	555 aa		11.49	□□□□□ -0.57
CCDC57-211	ENST00000578187	BCAS1	O75363	584 aa	Predicted RBP	11.49	□□□□□ -0.57
CCDC57-211	ENST00000578187	NTN1	O95631	604 aa		11.49	□□□□□ -0.57
CCDC57-211	ENST00000578187	CSTA	P01040	98 aa		11.49	□□□□□ -0.57
CCDC57-211	ENST00000578187	UBTFL6	P0CB48	400 aa	Predicted RBP	11.49	□□□□□ -0.57
CCDC57-211	ENST00000578187	CD99	P14209	185 aa		11.49	□□□□□ -0.57
CCDC57-211	ENST00000578187	GPX2	P18283	190 aa		11.49	□□□□□ -0.57
CCDC57-211	ENST00000578187	ELK4	P28324	431 aa		11.49	□□□□□ -0.57
CCDC57-211	ENST00000578187	LSP1	P33241	339 aa		11.49	□□□□□ -0.57
CCDC57-211	ENST00000578187	EIF1	P41567	113 aa	Known RBP	11.49	□□□□□ -0.57
CCDC57-211	ENST00000578187	CRISP3	P54108	245 aa		11.49	□□□□□ -0.57
CCDC57-211	ENST00000578187	CLDN15	P56746	228 aa		11.49	□□□□□ -0.57
CCDC57-211	ENST00000578187	FOXF1	Q12946	379 aa		11.49	□□□□□ -0.57
CCDC57-211	ENST00000578187	KLF10	Q13118	480 aa		11.49	□□□□□ -0.57
CCDC57-211	ENST00000578187	CBFB	Q13951	182 aa		11.49	□□□□□ -0.57
CCDC57-211	ENST00000578187	GNA13	Q14344	377 aa		11.49	□□□□□ -0.57
CCDC57-211	ENST00000578187	DAZAP2	Q15038	168 aa	Predicted RBP	11.49	□□□□□ -0.57
CCDC57-211	ENST00000578187	RUNDC3A	Q59EK9	446 aa		11.49	□□□□□ -0.57

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