RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 FRG2Q64ET8 278 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 STEAP4Q687X5 459 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 FAHD2BQ6P2I3 314 aaPredicted RBP5.15□□□□□ -1.59
SMG6-219ENST00000575663 KLHL24Q6TFL4 600 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 RAPH1Q70E73 1250 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 IKBIPQ70UQ0 350 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 GOLGA7Q7Z5G4 137 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 SPATA19Q7Z5L4 167 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 GALNT5Q7Z7M9 940 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 IGDCC3Q8IVU1 814 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 KLHL7Q8IXQ5 586 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 C17orf78Q8N4C9 275 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 OR7G2Q8NG99 324 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 AENQ8WTP8 325 aaKnown RBP5.15□□□□□ -1.59
SMG6-219ENST00000575663 NEU4Q8WWR8 484 aaPredicted RBP5.15□□□□□ -1.59
SMG6-219ENST00000575663 CDKL2Q92772 493 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 ATP6V1E2Q96A05 226 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 EXOSC8Q96B26 276 aaKnown RBP5.15□□□□□ -1.59
SMG6-219ENST00000575663 FAHD2AQ96GK7 314 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 LRRC37BQ96QE4 947 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 FRG2BQ96QU4 278 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 BBS4Q96RK4 519 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 ATOH8Q96SQ7 321 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 PKP2Q99959 881 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 RHOXF2Q9BQY4 288 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 RASSF4Q9H2L5 321 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 ELOVL6Q9H5J4 265 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 CXorf36Q9H7Y0 433 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 IPPKQ9H8X2 491 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 UNKLQ9H9P5 680 aaKnown RBP5.15□□□□□ -1.59
SMG6-219ENST00000575663 ZMAT3Q9HA38 289 aaKnown RBP5.15□□□□□ -1.59
SMG6-219ENST00000575663 NTN4Q9HB63 628 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 PLAC1Q9HBJ0 212 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 NMRAL1Q9HBL8 299 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 LPAR2Q9HBW0 351 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.15□□□□□ -1.59
SMG6-219ENST00000575663 DDX18Q9NVP1 670 aaKnown RBP5.15□□□□□ -1.59
SMG6-219ENST00000575663 NMRK1Q9NWW6 199 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 CPSF2Q9P2I0 782 aaKnown RBP5.15□□□□□ -1.59
SMG6-219ENST00000575663 SLC12A4Q9UP95 1085 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 TENM1Q9UKZ4 2725 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 MALRD1Q5VYJ5 2156 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 A0A087WV62 115 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 IGHV3-15A0A0B4J1V0 119 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 TRAV20A0A0B4J274 112 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 POM121CA8CG34 1229 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 SCDO00767 359 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 CYTIPO60759 359 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 SEC31AO94979 1220 aaKnown RBP5.14□□□□□ -1.59
SMG6-219ENST00000575663 OXSR1O95747 527 aaPredicted RBP5.14□□□□□ -1.59
SMG6-219ENST00000575663 NUDT14O95848 222 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 WNT11O96014 354 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 IGHV3-9P01782 118 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 ARAFP10398 606 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 ENPP1P22413 925 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 IVDP26440 423 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 ZFP36P26651 326 aaKnown RBP5.14□□□□□ -1.59
SMG6-219ENST00000575663 SHC1P29353 583 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 GP5P40197 560 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 KHKP50053 298 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 ALDH18A1P54886 795 aaKnown RBP5.14□□□□□ -1.59
SMG6-219ENST00000575663 RAC3P60763 192 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 IL13RA1P78552 427 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 TGFBR3Q03167 851 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 GTF2H2Q13888 395 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 SLC29A2Q14542 456 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 HEPACAMQ14CZ8 416 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 TRIP10Q15642 601 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 MST1LQ2TV78 715 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 GRAMD1BQ3KR37 738 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 TMEM176BQ3YBM2 270 aaPredicted RBP5.14□□□□□ -1.59
SMG6-219ENST00000575663 VPS26BQ4G0F5 336 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 HP1BP3Q5SSJ5 553 aaPredicted RBP5.14□□□□□ -1.59
SMG6-219ENST00000575663 GTF2H2CQ6P1K8 395 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 METTL2BQ6P1Q9 378 aaKnown RBP5.14□□□□□ -1.59
SMG6-219ENST00000575663 RBMS3Q6XE24 437 aaKnown RBP5.14□□□□□ -1.59
SMG6-219ENST00000575663 TRMT10CQ7L0Y3 403 aaKnown RBP5.14□□□□□ -1.59
SMG6-219ENST00000575663 ZNF786Q8N393 782 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 GATSQ8NAP1 163 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 C1orf162Q8NEQ5 155 aaPredicted RBP5.14□□□□□ -1.59
SMG6-219ENST00000575663 B4GALNT2Q8NHY0 566 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 POC1BQ8TC44 478 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 APH1AQ96BI3 265 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 ARL8AQ96BM9 186 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 TM4SF18Q96CE8 201 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 SH3YL1Q96HL8 342 aaPredicted RBP5.14□□□□□ -1.59
SMG6-219ENST00000575663 UBXN10Q96LJ8 280 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 CDK15Q96Q40 435 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 ZNF300Q96RE9 604 aaPredicted RBP5.14□□□□□ -1.59
SMG6-219ENST00000575663 FMO2Q99518 471 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 GPR22Q99680 433 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 NPAS1Q99742 590 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 SLC6A7Q99884 636 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 C1QTNF6Q9BXI9 259 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 SLITRK2Q9H156 845 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 COQ10BQ9H8M1 238 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 DYNLRB1Q9NP97 96 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 CA10Q9NS85 328 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 ZDHHC18Q9NUE0 388 aa5.14□□□□□ -1.59
SMG6-219ENST00000575663 MALT1Q9UDY8 824 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms