RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 ETV2O00321 342 aaPredicted RBP15.5■□□□□ 0.07
NUP88-210ENST00000574867 CDC40O60508 579 aaKnown RBP eCLIP15.5■□□□□ 0.07
NUP88-210ENST00000574867 HCN1O60741 890 aa15.5■□□□□ 0.07
NUP88-210ENST00000574867 CELA3AP09093 270 aa15.5■□□□□ 0.07
NUP88-210ENST00000574867 ZNF17P17021 662 aa15.5■□□□□ 0.07
NUP88-210ENST00000574867 HK1P19367 917 aa15.5■□□□□ 0.07
NUP88-210ENST00000574867 GCKP35557 465 aa15.5■□□□□ 0.07
NUP88-210ENST00000574867 EIF1P41567 113 aaKnown RBP15.5■□□□□ 0.07
NUP88-210ENST00000574867 KRTCAP3Q53RY4 240 aa15.5■□□□□ 0.07
NUP88-210ENST00000574867 ARSKQ6UWY0 536 aa15.5■□□□□ 0.07
NUP88-210ENST00000574867 RANBP3LQ86VV4 465 aaPredicted RBP15.5■□□□□ 0.07
NUP88-210ENST00000574867 ZNF563Q8TA94 476 aa15.5■□□□□ 0.07
NUP88-210ENST00000574867 TSPAN10Q9H1Z9 355 aaPredicted RBP15.5■□□□□ 0.07
NUP88-210ENST00000574867 PLSCR2Q9NRY7 297 aa15.5■□□□□ 0.07
NUP88-210ENST00000574867 NPIPA1Q9UND3 350 aa15.5■□□□□ 0.07
NUP88-210ENST00000574867 VDAC3Q9Y277 283 aa15.5■□□□□ 0.07
NUP88-210ENST00000574867 HEATR5AQ86XA9 2040 aa15.5■□□□□ 0.07
NUP88-210ENST00000574867 FAM208BQ5VWN6 2430 aa15.5■□□□□ 0.07
NUP88-210ENST00000574867 TMEM229AB2RXF0 380 aa15.5■□□□□ 0.07
NUP88-210ENST00000574867 GKN3PP0CG01 181 aa15.5■□□□□ 0.07
NUP88-210ENST00000574867 ATP6V1B2P21281 511 aa15.5■□□□□ 0.07
NUP88-210ENST00000574867 MST1P26927 711 aa15.5■□□□□ 0.07
NUP88-210ENST00000574867 RYKP34925 604 aa15.5■□□□□ 0.07
NUP88-210ENST00000574867 COPZ1P61923 177 aa15.5■□□□□ 0.07
NUP88-210ENST00000574867 QPRTQ15274 297 aa15.5■□□□□ 0.07
NUP88-210ENST00000574867 GEMIN6Q8WXD5 167 aaKnown RBP15.5■□□□□ 0.07
NUP88-210ENST00000574867 HSH2DQ96JZ2 352 aa15.5■□□□□ 0.07
NUP88-210ENST00000574867 PIGQQ9BRB3 760 aa15.5■□□□□ 0.07
NUP88-210ENST00000574867 DEFB127Q9H1M4 99 aa15.5■□□□□ 0.07
NUP88-210ENST00000574867 SLC7A8Q9UHI5 535 aa15.5■□□□□ 0.07
NUP88-210ENST00000574867 AP3D1O14617 1153 aa15.49■□□□□ 0.07
NUP88-210ENST00000574867 ACOT8O14734 319 aa15.49■□□□□ 0.07
NUP88-210ENST00000574867 FRS3O43559 492 aa15.49■□□□□ 0.07
NUP88-210ENST00000574867 SUSD5O60279 629 aa15.49■□□□□ 0.07
NUP88-210ENST00000574867 ZIC3O60481 467 aa15.49■□□□□ 0.07
NUP88-210ENST00000574867 FMO6PO60774 539 aa15.49■□□□□ 0.07
NUP88-210ENST00000574867 ADAM11O75078 769 aa15.49■□□□□ 0.07
NUP88-210ENST00000574867 PRKCAP17252 672 aa15.49■□□□□ 0.07
NUP88-210ENST00000574867 ACAA2P42765 397 aaKnown RBP15.49■□□□□ 0.07
NUP88-210ENST00000574867 TDGF1P3P51864 188 aa15.49■□□□□ 0.07
NUP88-210ENST00000574867 ZNF136P52737 540 aa15.49■□□□□ 0.07
NUP88-210ENST00000574867 DLX5P56178 289 aa15.49■□□□□ 0.07
NUP88-210ENST00000574867 MS4A2Q01362 244 aa15.49■□□□□ 0.07
NUP88-210ENST00000574867 RAET1LQ5VY80 246 aa15.49■□□□□ 0.07
NUP88-210ENST00000574867 YRDCQ86U90 279 aaKnown RBP15.49■□□□□ 0.07
NUP88-210ENST00000574867 GHDCQ8N2G8 530 aa15.49■□□□□ 0.07
NUP88-210ENST00000574867 MRGPRX4Q96LA9 322 aa15.49■□□□□ 0.07
NUP88-210ENST00000574867 LRGUKQ96M69 825 aa15.49■□□□□ 0.07
NUP88-210ENST00000574867 KLHDC3Q9BQ90 382 aa15.49■□□□□ 0.07
NUP88-210ENST00000574867 LDAHQ9H6V9 325 aa15.49■□□□□ 0.07
NUP88-210ENST00000574867 SH3GLB1Q9Y371 365 aa15.49■□□□□ 0.07
NUP88-210ENST00000574867 TRGV5A0A0B4J1U4 118 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 LINC01387J3KSC0 135 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 M0R3H8 397 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 ADH6P28332 368 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 MLLT10P55197 1068 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 KCNC4Q03721 635 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 FLOT2Q14254 428 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 IFI44LQ53G44 452 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 SLC25A53Q5H9E4 307 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 WIPI1Q5MNZ9 446 aaPredicted RBP15.48■□□□□ 0.07
NUP88-210ENST00000574867 CYP2R1Q6VVX0 501 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 TRILQ7L0X0 811 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 CARM1Q86X55 608 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 SPPL2CQ8IUH8 684 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 GTPBP8Q8N3Z3 284 aaPredicted RBP15.48■□□□□ 0.07
NUP88-210ENST00000574867 NEIL3Q8TAT5 605 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 ZNF559Q9BR84 538 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 SLC6A15Q9H2J7 730 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 POMPQ9Y244 141 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 LIPGQ9Y5X9 500 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 PCNX3Q9H6A9 2034 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 A0A1B0GVC2 190 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 B8ZZF3 427 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 GP1BBP13224 206 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 PRG2P13727 222 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 EDN3P14138 238 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 IDH2P48735 452 aaKnown RBP15.48■□□□□ 0.07
NUP88-210ENST00000574867 FOXF1Q12946 379 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 TOMM34Q15785 309 aaPredicted RBP15.48■□□□□ 0.07
NUP88-210ENST00000574867 TMEM44Q2T9K0 475 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 WBP2NLQ6ICG8 309 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 ARHGAP11AQ6P4F7 1023 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 AAGABQ6PD74 315 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 FKBP9P1Q75LS8 142 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 VTCN1Q7Z7D3 282 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 OR6T1Q8NGN1 323 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 VANGL1Q8TAA9 524 aaPredicted RBP15.48■□□□□ 0.07
NUP88-210ENST00000574867 SFXN2Q96NB2 322 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 TRIM2Q9C040 744 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 EXO5Q9H790 373 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 ACER3Q9NUN7 267 aa15.48■□□□□ 0.07
NUP88-210ENST00000574867 RPH3AQ9Y2J0 694 aaPredicted RBP15.48■□□□□ 0.07
NUP88-210ENST00000574867 NTN1O95631 604 aa15.47■□□□□ 0.07
NUP88-210ENST00000574867 CHMP24386 653 aa15.47■□□□□ 0.07
NUP88-210ENST00000574867 ELK4P28324 431 aa15.47■□□□□ 0.07
NUP88-210ENST00000574867 SLC1A3P43003 542 aa15.47■□□□□ 0.07
NUP88-210ENST00000574867 HTR3AP46098 478 aa15.47■□□□□ 0.07
NUP88-210ENST00000574867 SESN3P58005 492 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms