RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 SNX5Q9Y5X3 404 aa11.81□□□□□ -0.52
PRPF8-207ENST00000573681 NUP210LQ5VU65 1888 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 BDP1A6H8Y1 2624 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 A0A087WUJ7 227 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 TEX51A0A1B0GUA7 166 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 UNC119BA6NIH7 251 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 TMEM200CA6NKL6 621 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 C9orf172C9J069 976 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 PTGES3LE9PB15 166 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 FAM20BO75063 409 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 ADAM11O75078 769 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 DKK1O94907 266 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 RCBTB2O95199 551 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 NADKO95544 446 aaPredicted RBP11.8□□□□□ -0.52
PRPF8-207ENST00000573681 HMGN1P05114 100 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 IFI30P13284 250 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 JUNBP17275 347 aaPredicted RBP11.8□□□□□ -0.52
PRPF8-207ENST00000573681 GABRB1P18505 474 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 TTKP33981 857 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 LIMK1P53667 647 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 LSM11P83369 360 aaKnown RBP eCLIP11.8□□□□□ -0.52
PRPF8-207ENST00000573681 CD226Q15762 336 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 BTBD16Q32M84 506 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 SLC25A30Q5SVS4 291 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 MEDAGQ5VYS4 303 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 TMEM236Q5W0B7 351 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 SLC27A4Q6P1M0 643 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 KIRREL2Q6UWL6 708 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 TIPARPQ7Z3E1 657 aaKnown RBP11.8□□□□□ -0.52
PRPF8-207ENST00000573681 MARCH3Q86UD3 253 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 NLGN4XQ8N0W4 816 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 SLC43A2Q8N370 569 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 OR8J1Q8NGP2 316 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 GRHL3Q8TE85 626 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 BPIFA2Q96DR5 249 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 NODALQ96S42 347 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 POLDIP3Q9BY77 421 aaKnown RBP11.8□□□□□ -0.52
PRPF8-207ENST00000573681 LIN28AQ9H9Z2 209 aaKnown RBP11.8□□□□□ -0.52
PRPF8-207ENST00000573681 SDHAF3Q9NRP4 125 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 TCFL5Q9UL49 500 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 PCDHGB6Q9Y5F9 930 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 HS3ST3B1Q9Y662 390 aa11.8□□□□□ -0.52
PRPF8-207ENST00000573681 SCN2AQ99250 2005 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 EFCAB9A8MZ26 197 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 C21orf140B9A014 251 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 WWP2O00308 870 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 SOX14O95416 240 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 IGF2P01344 180 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 COX6A1P12074 109 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 PGCP20142 388 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 FMO3P31513 532 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 EVI2BP34910 448 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 SLC1A3P43003 542 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 SLC35A2P78381 396 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 C17orf67Q0P5P2 114 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 OCLNQ16625 522 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 NDUFAF6Q330K2 333 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 BORAQ6PGQ7 559 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 WDR88Q6ZMY6 472 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 MRGPREQ86SM8 312 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 KIF18BQ86Y91 864 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 SPARTQ8N0X7 666 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 FAM26EQ8N5C1 309 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 GATSQ8NAP1 163 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 ZNF540Q8NDQ6 660 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 OR5W2Q8NH69 310 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 CT55Q8WUE5 264 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 APH1BQ8WW43 257 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 HGDQ93099 445 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 MYDGFQ969H8 173 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 SLC38A2Q96QD8 506 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 TUBA1CQ9BQE3 449 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 TSSK6Q9BXA6 273 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 COL25A1Q9BXS0 654 aaPredicted RBP11.79□□□□□ -0.52
PRPF8-207ENST00000573681 ADAM19Q9H013 955 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 TVP23BQ9NYZ1 205 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 CNIH4Q9P003 139 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 PSORS1C1Q9UIG5 152 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 PCDHGB1Q9Y5G3 927 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 CDH10Q9Y6N8 788 aa11.79□□□□□ -0.52
PRPF8-207ENST00000573681 NCOR1O75376 2440 aa11.78□□□□□ -0.52
PRPF8-207ENST00000573681 NSG1A0A0A6YYJ2 146 aa11.78□□□□□ -0.52
PRPF8-207ENST00000573681 ELOA3DA6NLF2 546 aaPredicted RBP11.78□□□□□ -0.52
PRPF8-207ENST00000573681 SNTNA6NMZ2 147 aa11.78□□□□□ -0.52
PRPF8-207ENST00000573681 CLCA1A8K7I4 914 aa11.78□□□□□ -0.52
PRPF8-207ENST00000573681 SOCS6O14544 535 aa11.78□□□□□ -0.52
PRPF8-207ENST00000573681 OIP5O43482 229 aa11.78□□□□□ -0.52
PRPF8-207ENST00000573681 HCRTR2O43614 444 aa11.78□□□□□ -0.52
PRPF8-207ENST00000573681 PIP5K1CO60331 668 aa11.78□□□□□ -0.52
PRPF8-207ENST00000573681 PTP4A3O75365 173 aa11.78□□□□□ -0.52
PRPF8-207ENST00000573681 TNFSF15O95150 251 aa11.78□□□□□ -0.52
PRPF8-207ENST00000573681 IGFBP1P08833 259 aaPredicted RBP11.78□□□□□ -0.52
PRPF8-207ENST00000573681 FBXO45P0C2W1 286 aa11.78□□□□□ -0.52
PRPF8-207ENST00000573681 BMP7P18075 431 aa11.78□□□□□ -0.52
PRPF8-207ENST00000573681 CSRP1P21291 193 aaKnown RBP11.78□□□□□ -0.52
PRPF8-207ENST00000573681 ITPKBP27987 946 aa11.78□□□□□ -0.52
PRPF8-207ENST00000573681 MSX1P28360 303 aa11.78□□□□□ -0.52
PRPF8-207ENST00000573681 GPR4P46093 362 aa11.78□□□□□ -0.52
PRPF8-207ENST00000573681 PCYT1AP49585 367 aa11.78□□□□□ -0.52
PRPF8-207ENST00000573681 P2RX1P51575 399 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms