RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 MITFO75030 526 aaPredicted RBP9.34□□□□□ -0.91
SMG6-213ENST00000573166 BMP2P12643 396 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 SLC26A5P58743 744 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 PDE7AQ13946 482 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 ARHGAP11BQ3KRB8 267 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 LNX2Q8N448 690 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 OR4K13Q8NH42 304 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 SAMD8Q96LT4 415 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 WWTR1Q9GZV5 400 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 EVA1AQ9H8M9 152 aa9.34□□□□□ -0.91
SMG6-213ENST00000573166 SDK2Q58EX2 2172 aa9.34□□□□□ -0.92
SMG6-213ENST00000573166 A0A1B0GWA3 101 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 FAM166BA8MTA8 275 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 B4E171 279 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 BOLA2-SMG1P6H3BVE0 249 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 ACP2P11117 423 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 CCNOP22674 350 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 TALDO1P37837 337 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 TSPAN7P41732 249 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 STAT5AP42229 794 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 ZNF84P51523 738 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 ALG10Q5BKT4 473 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 GTF2IRD2BQ6EKJ0 949 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 MAMSTRQ6ZN01 415 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 GTF2IRD2Q86UP8 949 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 GPR137CQ8N3F9 429 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 SGCZQ96LD1 299 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 PLEKHA1Q9HB21 404 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 TCFL5Q9UL49 500 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 PIEZO1Q92508 2521 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 A0A1W2PPW3 197 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 FAM25AB3EWG3 89 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 FAM25CB3EWG5 89 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 FAM25GB3EWG6 89 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 PLOD2O00469 737 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 PCDH17O14917 1159 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 FOXS1O43638 330 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 MMP11P24347 488 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 CSNK2A1P68400 391 aaPredicted RBP9.33□□□□□ -0.92
SMG6-213ENST00000573166 MC2RQ01718 297 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 RGS21Q2M5E4 152 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 CMPK2Q5EBM0 449 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 ARMC4Q5T2S8 1044 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 OGFRL1Q5TC84 451 aaPredicted RBP9.33□□□□□ -0.92
SMG6-213ENST00000573166 TMPRSS9Q7Z410 1059 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 CAMKMTQ7Z624 323 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 OR52E2Q8NGJ4 325 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 OR51G2Q8NGK0 314 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 OR8J1Q8NGP2 316 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 OR6N2Q8NGY6 317 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 TSEN15Q8WW01 171 aaKnown RBP9.33□□□□□ -0.92
SMG6-213ENST00000573166 C10orf90Q96M02 699 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 FAM210AQ96ND0 272 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 POLR2J2Q9GZM3 115 aaKnown RBP9.33□□□□□ -0.92
SMG6-213ENST00000573166 CD300AQ9UGN4 299 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 ITGB1BP2Q9UKP3 347 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 CAMK2AQ9UQM7 478 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 PCDHGA1Q9Y5H4 931 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 SAGE2PA6NJ88 616 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 ZNF891A8MT65 544 aaPredicted RBP9.33□□□□□ -0.92
SMG6-213ENST00000573166 RPP14O95059 124 aaKnown RBP9.33□□□□□ -0.92
SMG6-213ENST00000573166 EMP3P54852 163 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 EEF1A1P68104 462 aaKnown RBP9.33□□□□□ -0.92
SMG6-213ENST00000573166 SF3B4Q15427 424 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMG6-213ENST00000573166 SPANXN2Q5MJ10 180 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 ARHGAP11AQ6P4F7 1023 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 ANKRD37Q7Z713 158 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 OR8H2Q8N162 312 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 ORAI3Q9BRQ5 295 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 FBXO8Q9NRD0 319 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 GPR83Q9NYM4 423 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 RBMX2Q9Y388 322 aaKnown RBP9.33□□□□□ -0.92
SMG6-213ENST00000573166 PCDHGB1Q9Y5G3 927 aa9.33□□□□□ -0.92
SMG6-213ENST00000573166 MAGED1Q9Y5V3 778 aaPredicted RBP9.33□□□□□ -0.92
SMG6-213ENST00000573166 ZFC3H1O60293 1989 aaKnown RBP9.33□□□□□ -0.92
SMG6-213ENST00000573166 TBX19O60806 448 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 TNFRSF21O75509 655 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 HPRP00739 348 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 CHRM4P08173 479 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 PRKCAP17252 672 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 MYL9P24844 172 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 PSMA1P25786 263 aaKnown RBP9.32□□□□□ -0.92
SMG6-213ENST00000573166 IDUAP35475 653 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 RPS5P46782 204 aaKnown RBP9.32□□□□□ -0.92
SMG6-213ENST00000573166 HNRNPFP52597 415 aaKnown RBP9.32□□□□□ -0.92
SMG6-213ENST00000573166 PRPS1P60891 318 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 HSF2Q03933 536 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 QPRTQ15274 297 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 KRT77Q7Z794 578 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 TMPRSS12Q86WS5 348 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 PTRH1Q86Y79 214 aaKnown RBP9.32□□□□□ -0.92
SMG6-213ENST00000573166 IQCF1Q8N6M8 205 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 ZNF675Q8TD23 568 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 WDR77Q9BQA1 342 aaPredicted RBP9.32□□□□□ -0.92
SMG6-213ENST00000573166 MENTQ9BUN1 341 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 C6orf62Q9GZU0 229 aaPredicted RBP9.32□□□□□ -0.92
SMG6-213ENST00000573166 TPK1Q9H3S4 243 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 MN1Q10571 1320 aaPredicted RBP9.32□□□□□ -0.92
SMG6-213ENST00000573166 C7orf72A4D263 438 aa9.32□□□□□ -0.92
SMG6-213ENST00000573166 ICOSLGO75144 302 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms