RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 TCAF1Q9Y4C2 921 aa4.51□□□□□ -1.69
TOPBP1-210ENST00000572787 PTGDR2Q9Y5Y4 395 aa4.51□□□□□ -1.69
TOPBP1-210ENST00000572787 SPIN1Q9Y657 262 aaPredicted RBP4.51□□□□□ -1.69
TOPBP1-210ENST00000572787 SAR1BQ9Y6B6 198 aa4.51□□□□□ -1.69
TOPBP1-210ENST00000572787 ADGRL3Q9HAR2 1447 aa4.51□□□□□ -1.69
TOPBP1-210ENST00000572787 FGD5Q6ZNL6 1462 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 A0A087X1B8 175 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 TRBV9A0A0B4J1U6 114 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 A0A1W2PPV9 198 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 FUOMA2VDF0 154 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 TAPBPO15533 448 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 UGDHO60701 494 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 SNAPINO95295 136 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 PSMG1O95456 288 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 FGGP02679 453 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 P04436 131 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 IFNW1P05000 195 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 HSPD1P10809 573 aaKnown RBP4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 ANXA3P12429 323 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 CD59P13987 128 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 ENGP17813 658 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 DTYMKP23919 212 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 G0S2P27469 103 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 IFNA8P32881 189 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 CD96P40200 585 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 MAGEA5P43359 124 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 GLUD2P49448 558 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 MFGE8Q08431 387 aaPredicted RBP4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 ZNF415Q09FC8 603 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 SELENBP1Q13228 472 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 TFDP1Q14186 410 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 ATXN7L3Q14CW9 347 aaPredicted RBP4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 EARS2Q5JPH6 523 aaKnown RBP4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 OR2G6Q5TZ20 316 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 REEP3Q6NUK4 255 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 SLC27A4Q6P1M0 643 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 ARMCX5Q6P1M9 558 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 C19orf35Q6ZS72 473 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 BCDIN3DQ7Z5W3 292 aaKnown RBP4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 CTU1Q7Z7A3 348 aaKnown RBP4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 C17orf64Q86WR6 236 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 GPR135Q8IZ08 494 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 METTL4Q8N3J2 472 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 TRAM1L1Q8N609 369 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 CDRT4Q8N9R6 151 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 OR4F6Q8NGB9 312 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 OR10A7Q8NGE5 316 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 OR52I1Q8NGK6 324 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 RDH11Q8TC12 318 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 DNAJB3Q8WWF6 145 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 ASB10Q8WXI3 467 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 NTAN1Q96AB6 310 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 S100PBPQ96BU1 408 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 TIMD4Q96H15 378 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 TXNDC15Q96J42 360 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 PACRGQ96M98 296 aaPredicted RBP4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 TNFRSF13CQ96RJ3 184 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 TIMM29Q9BSF4 260 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 RSG1Q9BU20 258 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 NPFFR1Q9GZQ6 430 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 ZNF665Q9H7R5 613 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 ACKR4Q9NPB9 350 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 BATF3Q9NR55 127 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 SIRT7Q9NRC8 400 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 IL17RBQ9NRM6 502 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 THSD1Q9NS62 852 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 C2orf42Q9NWW7 574 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 C1orf109Q9NX04 203 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 GPR83Q9NYM4 423 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 IL36GQ9NZH8 169 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 KLRF1Q9NZS2 232 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 UVRAGQ9P2Y5 699 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 GHRLQ9UBU3 117 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 PAIP2BQ9ULR5 123 aaKnown RBP4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 MYO6Q9UM54 1294 aa4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 POLR3HQ9Y535 204 aaPredicted RBP4.5□□□□□ -1.69
TOPBP1-210ENST00000572787 PRAG1Q86YV5 1406 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 A0A1W2PPC1 479 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 ZNF732B4DXR9 585 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 M0R036 132 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 PRMT5O14744 637 aaPredicted RBP4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 CASKO14936 926 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 TFECO14948 347 aaPredicted RBP4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 SRPX2O60687 465 aaPredicted RBP4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 RAMP3O60896 148 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 RBMXL2O75526 392 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 ADAP1O75689 374 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 SC5DO75845 299 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 DIRAS1O95057 198 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 ACTL6AO96019 429 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 GIMD1P0DJR0 217 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 PRF1P14222 555 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 GPX3P22352 226 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 CXCR2P25025 360 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 IVDP26440 423 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 PSMB5P28074 263 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 GPR1P46091 355 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 RFX5P48382 616 aaPredicted RBP4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 XKP51811 444 aa4.49□□□□□ -1.69
TOPBP1-210ENST00000572787 NKX2-5P52952 324 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms