RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 EEF2KO00418 725 aaKnown RBP4.82□□□□□ -1.64
SF3B3-214ENST00000572365 SPRY1O43609 319 aaPredicted RBP4.82□□□□□ -1.64
SF3B3-214ENST00000572365 BCL10O95999 233 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 HBQ1P09105 142 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 CYP11B1P15538 503 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 ERCC2P18074 760 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 HLA-DPA1P20036 260 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 CPT2P23786 658 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 PHBP35232 272 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 NSG1P42857 185 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 ADARP55265 1226 aaKnown RBP4.82□□□□□ -1.64
SF3B3-214ENST00000572365 IL10RBQ08334 325 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 PRKAA1Q13131 559 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 MELKQ14680 651 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 SPCS2Q15005 226 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 SPA17Q15506 151 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 SNAPC1Q16533 368 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 CCDC122Q5T0U0 273 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 C6orf163Q5TEZ5 329 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 TMEM211Q6ICI0 200 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 TEX38Q6PEX7 206 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 CAMKMTQ7Z624 323 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 PIGWQ7Z7B1 504 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 AMZ2Q86W34 360 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 ZDHHC17Q8IUH5 632 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 SIAH3Q8IW03 269 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 C1orf87Q8N0U7 546 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 CLYBLQ8N0X4 340 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 RASGEF1AQ8N9B8 481 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 NOA1Q8NC60 698 aaKnown RBP4.82□□□□□ -1.64
SF3B3-214ENST00000572365 ELP5Q8TE02 316 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 TMED6Q8WW62 240 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 LCN9Q8WX39 176 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 GLYATL1Q969I3 302 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 ABTB1Q969K4 478 aaPredicted RBP4.82□□□□□ -1.64
SF3B3-214ENST00000572365 PIGTQ969N2 578 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 ZIM3Q96PE6 472 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 PSKH2Q96QS6 385 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 C19orf24Q9BVV8 132 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 DEFB127Q9H1M4 99 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 SRMSQ9H3Y6 488 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 PLEKHF2Q9H8W4 249 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 SPHK1Q9NYA1 384 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 POMT2Q9UKY4 750 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 ARL2BPQ9Y2Y0 163 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 PPIL1Q9Y3C6 166 aa4.82□□□□□ -1.64
SF3B3-214ENST00000572365 FREM1Q5H8C1 2179 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 HEATR5BQ9P2D3 2071 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 A0A1W2PRQ8 180 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 HTR3EA5X5Y0 456 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 NPIPA2E9PIF3 369 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 NPIPA3F8WFD2 350 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 RASGRF2O14827 1237 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 BUD23O43709 281 aaKnown RBP4.81□□□□□ -1.64
SF3B3-214ENST00000572365 SOCS5O75159 536 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 DCTN3O75935 186 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 SIX3O95343 332 aaPredicted RBP4.81□□□□□ -1.64
SF3B3-214ENST00000572365 HPP00738 406 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 IGKV2-30P06310 120 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 COX6A1P12074 109 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 PRKCIP41743 596 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 SEC61A1P61619 476 aaKnown RBP4.81□□□□□ -1.64
SF3B3-214ENST00000572365 OC90Q02509 493 aaPredicted RBP4.81□□□□□ -1.64
SF3B3-214ENST00000572365 CACNG1Q06432 222 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 BOLA3Q53S33 107 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 TTMPQ5BVD1 217 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 ARMC3Q5W041 872 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 PODNL1Q6PEZ8 512 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 WASH2PQ6VEQ5 465 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 RBPMS2Q6ZRY4 209 aaKnown RBP4.81□□□□□ -1.64
SF3B3-214ENST00000572365 NDUFAF7Q7L592 441 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 NANOGNBQ7Z5D8 188 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 CFAP206Q8IYR0 622 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 RNF113BQ8IZP6 322 aaKnown RBP4.81□□□□□ -1.64
SF3B3-214ENST00000572365 IQCF1Q8N6M8 205 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 FAM57AQ8TBR7 257 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 WDR20Q8TBZ3 569 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 SCARB1Q8WTV0 552 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 PHF10Q8WUB8 498 aaKnown RBP4.81□□□□□ -1.64
SF3B3-214ENST00000572365 SLC38A5Q8WUX1 472 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 DGCR14Q96DF8 476 aaKnown RBP4.81□□□□□ -1.64
SF3B3-214ENST00000572365 SPACA9Q96E40 222 aaPredicted RBP4.81□□□□□ -1.64
SF3B3-214ENST00000572365 SNF8Q96H20 258 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 CCT7Q99832 543 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 TIMM29Q9BSF4 260 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 DRC3Q9H069 523 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 YAE1D1Q9NRH1 226 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 HAO2Q9NYQ3 351 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 PKD2L2Q9NZM6 624 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 AIPL1Q9NZN9 384 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 C3orf18Q9UK00 162 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 SNX12Q9UMY4 172 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 IKBKGQ9Y6K9 419 aa4.81□□□□□ -1.64
SF3B3-214ENST00000572365 MALRD1Q5VYJ5 2156 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 IQANK1A0A1B0GTG1 560 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 URADA6NGE7 173 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 CCDC188H7C350 402 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 ARHGEF9O43307 516 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 DNAJB6O75190 326 aa4.8□□□□□ -1.64
SF3B3-214ENST00000572365 PMS2P2O95744 297 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms