RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 PAGE3Q5JUK9 113 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 PDSS1Q5T2R2 415 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 OR2A2Q6IF42 318 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 MEX3BQ6ZN04 569 aaKnown RBP12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 ESPNLQ6ZVH7 1005 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 LILRA2Q8N149 483 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 FAM71CQ8NEG0 241 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 FBXO27Q8NI29 283 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 INTS12Q96CB8 462 aaKnown RBP12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 ZNF845Q96IR2 970 aaPredicted RBP12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 MRGPRX4Q96LA9 322 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 TREX2Q9BQ50 279 aaPredicted RBP12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 THUMPD3Q9BV44 507 aaKnown RBP12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 SFXN3Q9BWM7 321 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 TMEM120AQ9BXJ8 343 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 QRSL1Q9H0R6 528 aaKnown RBP12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 ZNF385DQ9H6B1 395 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 CCDC134Q9H6E4 229 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 FGFR1OP2Q9NVK5 253 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 ZNF175Q9Y473 711 aa12.43□□□□□ -0.42
HERPUD1-218ENST00000569569 AGAP5A6NIR3 686 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 ETV2O00321 342 aaPredicted RBP12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 ADAMDEC1O15204 470 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 EFNA2O43921 213 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 OPN1LWP04000 364 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 CRHP06850 196 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 DBIP07108 87 aaKnown RBP12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 TFPTP0C1Z6 253 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 IL7RP16871 459 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 PPIBP23284 216 aaKnown RBP12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 EIF1AXP47813 144 aaKnown RBP12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 ARFIP2P53365 341 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 CRISP3P54108 245 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 FOXF2Q12947 444 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 GNA13Q14344 377 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 PON3Q15166 354 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 QPRTQ15274 297 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 MAPK11Q15759 364 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 CTU2Q2VPK5 515 aaKnown RBP12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 FBXL19-AS1Q494R0 122 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 MCEMP1Q8IX19 187 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 DMRTC2Q8IXT2 367 aaPredicted RBP12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 CMIPQ8IY22 773 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 PEX5LQ8IYB4 626 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 OR10D3Q8NH80 312 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 TSPEARQ8WU66 669 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 SLC38A5Q8WUX1 472 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 WDR60Q8WVS4 1066 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 TMEM234Q8WY98 164 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 ST8SIA1Q92185 356 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 FIG4Q92562 907 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 ADGRG7Q96K78 797 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 SLC24A3Q9HC58 644 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 SLC25A37Q9NYZ2 338 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 VAPAQ9P0L0 249 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 SLAMF8Q9P0V8 285 aa12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 LEF1Q9UJU2 399 aaPredicted RBP12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 FOXD3Q9UJU5 478 aaPredicted RBP12.42□□□□□ -0.42
HERPUD1-218ENST00000569569 A0A0G2JPF8 293 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 A0A0J9YW62 118 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 GJE1A6NN92 205 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 HNRNPCL2B2RXH8 293 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 HNRNPCL3B7ZW38 293 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 TNFSF11O14788 317 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 MAST4O15021 2626 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 HNRNPCL1O60812 293 aaKnown RBP12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 NTN1O95631 604 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 BCHEP06276 602 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 HNRNPCL4P0DMR1 293 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 BMP2P12643 396 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 CD1EP15812 388 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 IL11P20809 199 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 RPS4Y1P22090 263 aaKnown RBP12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 PEX19P40855 299 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 MDH1P40925 334 aaKnown RBP12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 SELENBP1Q13228 472 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 FREM1Q5H8C1 2179 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 HMGN2P46Q86SG4 172 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 MSRB3Q8IXL7 192 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 GCNT2Q8N0V5 402 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 OR2V1Q8NHB1 315 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 FNDC9Q8TBE3 224 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 RNASE6Q93091 150 aaKnown RBP12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 ZNF524Q96C55 264 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 KLHL15Q96M94 604 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 PRRG4Q9BZD6 226 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 TMEM185BQ9H7F4 350 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 RNF122Q9H9V4 155 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 EXOSC3Q9NQT5 275 aaKnown RBP12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 MRGBPQ9NV56 204 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 JKAMPQ9P055 326 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 MCTS1Q9ULC4 181 aaKnown RBP12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 NDUFAF1Q9Y375 327 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 GMEB1Q9Y692 573 aa12.41□□□□□ -0.42
HERPUD1-218ENST00000569569 DSPPQ9NZW4 1301 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 DCHS2Q6V1P9 2916 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 TRBV5-3A0A0A0MS03 114 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 A0A1W2PNV4 684 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 CLDN24A6NM45 220 aa12.4□□□□□ -0.42
HERPUD1-218ENST00000569569 EVPLLA8MZ36 301 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 264.8 ms