RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 FOXL2P58012 376 aa11.22□□□□□ -0.61
TMEM170A-205ENST00000568559 PRAMEF20Q5VT98 475 aa11.22□□□□□ -0.61
TMEM170A-205ENST00000568559 TSPYL5Q86VY4 417 aaPredicted RBP11.22□□□□□ -0.61
TMEM170A-205ENST00000568559 MORN4Q8NDC4 146 aa11.22□□□□□ -0.61
TMEM170A-205ENST00000568559 NEK7Q8TDX7 302 aa11.22□□□□□ -0.61
TMEM170A-205ENST00000568559 ERMAPQ96PL5 475 aaPredicted RBP11.22□□□□□ -0.61
TMEM170A-205ENST00000568559 ASPNQ9BXN1 380 aa11.22□□□□□ -0.61
TMEM170A-205ENST00000568559 MCUBQ9NWR8 336 aa11.22□□□□□ -0.61
TMEM170A-205ENST00000568559 NTNG1Q9Y2I2 539 aa11.22□□□□□ -0.61
TMEM170A-205ENST00000568559 DIDO1Q9BTC0 2240 aaKnown RBP11.22□□□□□ -0.61
TMEM170A-205ENST00000568559 IRGMA1A4Y4 181 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 TMCC2O75069 709 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 IGHEP01854 428 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 SNTA1Q13424 505 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 SQSTM1Q13501 440 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 SPANXN2Q5MJ10 180 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 ANKRD34AQ69YU3 496 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 TCTN3Q6NUS6 607 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 ARL9Q6T311 187 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 OPN5Q6U736 354 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 MAMSTRQ6ZN01 415 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 OVCH1Q7RTY7 1134 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 MARCH3Q86UD3 253 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 FAM181AQ8N9Y4 354 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 CLEC1AQ8NC01 280 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 SIMC1Q8NDZ2 872 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 HTRA1Q92743 480 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 ZC3H10Q96K80 434 aaKnown RBP11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 DCBLD2Q96PD2 775 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 TAAR9Q96RI9 348 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 BCL2L14Q9BZR8 327 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 AICDAQ9GZX7 198 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 CAB39Q9Y376 341 aaPredicted RBP11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 J3QRK9 145 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 ICAM2P13598 275 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 SLC6A8P48029 635 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 CDH11P55287 796 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 RAB25P57735 213 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 PTGES3Q15185 160 aaKnown RBP11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 ESX1Q8N693 406 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 HDAC2Q92769 488 aaKnown RBP11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 BARD1Q99728 777 aaKnown RBP11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 SNTG1Q9NSN8 517 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 NPFFR2Q9Y5X5 522 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 B3GALT1Q9Y5Z6 326 aa11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 SPIN1Q9Y657 262 aaPredicted RBP11.21□□□□□ -0.61
TMEM170A-205ENST00000568559 ELAVL4P26378 380 aaKnown RBP11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 DLSTP36957 453 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 CLDN6P56747 220 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 SLC3A1Q07837 685 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 DUSP8Q13202 625 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 PMS2P3Q13401 168 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 NDUFAF6Q330K2 333 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 RAET1LQ5VY80 246 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 CCDC80Q76M96 950 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 FLVCR1-AS1Q8TAF5 88 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 BPIFA2Q96DR5 249 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 SAMD8Q96LT4 415 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 GPER1Q99527 375 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 S100A13Q99584 98 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 LDAHQ9H6V9 325 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 ZNF160Q9HCG1 818 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 RXFP3Q9NSD7 469 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 NOTCH3Q9UM47 2321 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 MN1Q10571 1320 aaPredicted RBP11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 VSTM2BA6NLU5 285 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 HRKO00198 91 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 MAGEB3O15480 346 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 RNF13O43567 381 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 GALR2O43603 387 aaPredicted RBP11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 CBX7O95931 251 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 ADORA3P0DMS8 318 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 SMIM10L1P0DMW3 83 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 GDI2P50395 445 aaKnown RBP11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 CHAF1BQ13112 559 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 KLHL22Q53GT1 634 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 HES3Q5TGS1 186 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 PIWIL3Q7Z3Z3 882 aaKnown RBP11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 LHFPL3Q86UP9 236 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 C19orf18Q8NEA5 215 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 OR8J1Q8NGP2 316 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 SLC7A13Q8TCU3 470 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 SMIM10Q96HG1 83 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 PRRX2Q99811 253 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 NIPSNAP1Q9BPW8 284 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 POLR2J2Q9GZM3 115 aaKnown RBP11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 ACER3Q9NUN7 267 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 KCND3Q9UK17 655 aa11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 FARSAQ9Y285 508 aaKnown RBP11.21□□□□□ -0.62
TMEM170A-205ENST00000568559 A0A1B0GWA3 101 aa11.2□□□□□ -0.62
TMEM170A-205ENST00000568559 PRR19A6NJB7 356 aa11.2□□□□□ -0.62
TMEM170A-205ENST00000568559 IDH3BO43837 385 aa11.2□□□□□ -0.62
TMEM170A-205ENST00000568559 STAT5AP42229 794 aa11.2□□□□□ -0.62
TMEM170A-205ENST00000568559 EMP3P54852 163 aa11.2□□□□□ -0.62
TMEM170A-205ENST00000568559 CBFBQ13951 182 aa11.2□□□□□ -0.62
TMEM170A-205ENST00000568559 C11orf88Q6PI97 169 aa11.2□□□□□ -0.62
TMEM170A-205ENST00000568559 FAM220AQ7Z4H9 259 aa11.2□□□□□ -0.62
TMEM170A-205ENST00000568559 FBXO34Q9NWN3 711 aa11.2□□□□□ -0.62
TMEM170A-205ENST00000568559 TAS2R10Q9NYW0 307 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms