RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	ADH6	P28332	368 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	IFNA8	P32881	189 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	MSX2	P35548	267 aa	Predicted RBP	13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	IDH2	P48735	452 aa	Known RBP	13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	EPS8	Q12929	822 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	TRAP1	Q12931	704 aa	Known RBP	13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	QPRT	Q15274	297 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	FXN	Q16595	210 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	PRR30	Q53SZ7	412 aa	Predicted RBP	13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	WIPI1	Q5MNZ9	446 aa	Predicted RBP	13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ENPP6	Q6UWR7	440 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ARSK	Q6UWY0	536 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	GFRAL	Q6UXV0	394 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	CBLL1	Q75N03	491 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	TRIL	Q7L0X0	811 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	YTHDF3	Q7Z739	585 aa	Known RBP	13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	NEIL3	Q8TAT5	605 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	SARAF	Q96BY9	339 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	CCDC124	Q96CT7	223 aa	Known RBP	13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ASB9	Q96DX5	294 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	MRGPRX4	Q96LA9	322 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	SLX1A	Q9BQ83	275 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ZNF559	Q9BR84	538 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	CADM1	Q9BY67	442 aa	Known RBP	13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	TRIM2	Q9C040	744 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	PCDHAC1	Q9H158	963 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	TMEM27	Q9HBJ8	222 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	SERINC1	Q9NRX5	453 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ACER3	Q9NUN7	267 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	TES	Q9UGI8	421 aa	Known RBP	13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	RPH3A	Q9Y2J0	694 aa	Predicted RBP	13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	SH3GLB1	Q9Y371	365 aa		13.52	□□□□□ -0.25
KLHDC4-223	ENST00000568499	NIN	Q8N4C6	2090 aa		13.51	□□□□□ -0.25
KLHDC4-223	ENST00000568499	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		13.51	□□□□□ -0.25
KLHDC4-223	ENST00000568499	C7orf72	A4D263	438 aa		13.51	□□□□□ -0.25
KLHDC4-223	ENST00000568499	OR14I1	A6ND48	311 aa		13.51	□□□□□ -0.25
KLHDC4-223	ENST00000568499	AQP7	O14520	342 aa		13.51	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ZIC3	O60481	467 aa		13.51	□□□□□ -0.25
KLHDC4-223	ENST00000568499	PRB1	P04280	392 aa		13.51	□□□□□ -0.25
KLHDC4-223	ENST00000568499	CELA3A	P09093	270 aa		13.51	□□□□□ -0.25
KLHDC4-223	ENST00000568499	CD247	P20963	164 aa		13.51	□□□□□ -0.25
KLHDC4-223	ENST00000568499	CHM	P24386	653 aa		13.51	□□□□□ -0.25
KLHDC4-223	ENST00000568499	PLPPR5	Q32ZL2	321 aa		13.51	□□□□□ -0.25
KLHDC4-223	ENST00000568499	WBP2NL	Q6ICG8	309 aa		13.51	□□□□□ -0.25
KLHDC4-223	ENST00000568499	GRINA	Q7Z429	371 aa		13.51	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ATCAY	Q86WG3	371 aa		13.51	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ULK2	Q8IYT8	1036 aa		13.51	□□□□□ -0.25
KLHDC4-223	ENST00000568499	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.51	□□□□□ -0.25
KLHDC4-223	ENST00000568499	OR52E4	Q8NGH9	312 aa		13.51	□□□□□ -0.25
KLHDC4-223	ENST00000568499	CLPTM1L	Q96KA5	538 aa		13.51	□□□□□ -0.25
KLHDC4-223	ENST00000568499	SLC6A15	Q9H2J7	730 aa		13.51	□□□□□ -0.25
KLHDC4-223	ENST00000568499	DCAF13	Q9NV06	445 aa	Known RBP	13.51	□□□□□ -0.25
KLHDC4-223	ENST00000568499	SPIN1	Q9Y657	262 aa	Predicted RBP	13.51	□□□□□ -0.25
KLHDC4-223	ENST00000568499	BOD1L1	Q8NFC6	3051 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499		A0A1B0GVC2	190 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	GJE1	A6NN92	205 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	FMO6P	O60774	539 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	BCAS1	O75363	584 aa	Predicted RBP	13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	CIB2	O75838	187 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	PRKCA	P17252	672 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	TCEA1	P23193	301 aa	Known RBP	13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	FKBP2	P26885	142 aa	Known RBP	13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	PTGS2	P35354	604 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	APOBEC1	P41238	236 aa	Known RBP	13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	SLC1A3	P43003	542 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	TDGF1P3	P51864	188 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	SESN3	P58005	492 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	KCNC4	Q03721	635 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	MERTK	Q12866	999 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	NRF1	Q16656	503 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	GLIPR1L2	Q4G1C9	344 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	IFI44L	Q53G44	452 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	PGM2L1	Q6PCE3	622 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	CARM1	Q86X55	608 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	SPPL2C	Q8IUH8	684 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	CADM2	Q8N3J6	435 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ST6GALNAC3	Q8NDV1	305 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	GPR32P1	Q8NGA4	272 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	VANGL1	Q8TAA9	524 aa	Predicted RBP	13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	GEMIN6	Q8WXD5	167 aa	Known RBP	13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ABTB1	Q969K4	478 aa	Predicted RBP	13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ARHGDIG	Q99819	225 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	PLSCR2	Q9NRY7	297 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ACAD8	Q9UKU7	415 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	CHST2	Q9Y4C5	530 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	HRH3	Q9Y5N1	445 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	AP4B1	Q9Y6B7	739 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ZFYVE26	Q68DK2	2539 aa		13.5	□□□□□ -0.25
KLHDC4-223	ENST00000568499	FAM208B	Q5VWN6	2430 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499		A0A1B0GTH9	108 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	OR2M5	A3KFT3	312 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499		M0R3H8	397 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	BCKDK	O14874	412 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	FRS3	O43559	492 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	IFNW1	P05000	195 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	PEPD	P12955	493 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ABO	P16442	354 aa		13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	POU3F2	P20265	443 aa	Predicted RBP	13.49	□□□□□ -0.25
KLHDC4-223	ENST00000568499	ELK4	P28324	431 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms