RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 DUSP22Q9NRW4 184 aa8.2□□□□□ -1.1
CDH13-210ENST00000567445 ZCCHC3Q9NUD5 404 aaKnown RBP8.2□□□□□ -1.1
CDH13-210ENST00000567445 FBXO34Q9NWN3 711 aa8.2□□□□□ -1.1
CDH13-210ENST00000567445 POLR3KQ9Y2Y1 108 aaPredicted RBP8.2□□□□□ -1.1
CDH13-210ENST00000567445 USF3Q68DE3 2245 aa8.2□□□□□ -1.1
CDH13-210ENST00000567445 HIVEP2P31629 2446 aa8.2□□□□□ -1.1
CDH13-210ENST00000567445 ZANQ9Y493 2812 aa8.2□□□□□ -1.1
CDH13-210ENST00000567445 A0A096LPE4 126 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 A0A0J9YW62 118 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.19□□□□□ -1.1
CDH13-210ENST00000567445 A0A1W2PPZ6 126 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 TMEM114B3SHH9 223 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 TMEM233B4DJY2 109 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 SCAMP2O15127 329 aaKnown RBP8.19□□□□□ -1.1
CDH13-210ENST00000567445 HMGN2P05204 90 aaKnown RBP8.19□□□□□ -1.1
CDH13-210ENST00000567445 TUBBP07437 444 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 FGF4P08620 206 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 LINGO3P0C6S8 592 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 EFNA1P20827 205 aaPredicted RBP8.19□□□□□ -1.1
CDH13-210ENST00000567445 ELK4P28324 431 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 HPCAL1P37235 193 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 PRIM2P49643 509 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 NR1H2P55055 460 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 CARD18P57730 90 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 POU6F2P78424 691 aaPredicted RBP8.19□□□□□ -1.1
CDH13-210ENST00000567445 CD226Q15762 336 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 GFOD2Q3B7J2 385 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 UGT3A2Q3SY77 523 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 CCNJQ5T5M9 372 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 MTERF4Q7Z6M4 381 aaKnown RBP8.19□□□□□ -1.1
CDH13-210ENST00000567445 LILRA2Q8N149 483 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 POC1BQ8TC44 478 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 TWIST2Q8WVJ9 160 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 IGFBPL1Q8WX77 278 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 OSTF1Q92882 214 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 CDS1Q92903 461 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 OTUB1Q96FW1 271 aaPredicted RBP8.19□□□□□ -1.1
CDH13-210ENST00000567445 KLHL15Q96M94 604 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 CLUHP3Q96NS8 147 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 KLHDC3Q9BQ90 382 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 ACTR6Q9GZN1 396 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 OR10A4Q9H209 315 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 PIGUQ9H490 435 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 EML4Q9HC35 981 aaKnown RBP8.19□□□□□ -1.1
CDH13-210ENST00000567445 SIRT3Q9NTG7 399 aaPredicted RBP8.19□□□□□ -1.1
CDH13-210ENST00000567445 GIN1Q9NXP7 522 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 ATP6V1HQ9UI12 483 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 GPR52Q9Y2T5 361 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 TRAF6Q9Y4K3 522 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 NUP214P35658 2090 aaPredicted RBP8.19□□□□□ -1.1
CDH13-210ENST00000567445 TRIM64A6NGJ6 449 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 TRIM64BA6NI03 449 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 PIP5K1BO14986 540 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 NPHS1O60500 1241 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 SOX30O94993 753 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 CHRNGP07510 517 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 PABPC4LP0CB38 370 aaKnown RBP8.19□□□□□ -1.1
CDH13-210ENST00000567445 LAMP1P11279 417 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 PAX1P15863 534 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 ATP6V1C1P21283 382 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 AGTR1P30556 359 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 ALDH3A1P30838 453 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 RPL3P39023 403 aaKnown RBP8.19□□□□□ -1.1
CDH13-210ENST00000567445 PTH2RP49190 550 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 ZNF117Q03924 483 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 LASP1Q14847 261 aaKnown RBP8.19□□□□□ -1.1
CDH13-210ENST00000567445 RNPS1Q15287 305 aaKnown RBP8.19□□□□□ -1.1
CDH13-210ENST00000567445 ZNF239Q16600 458 aaKnown RBP8.19□□□□□ -1.1
CDH13-210ENST00000567445 KLHL26Q53HC5 615 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 ARL13AQ5H913 290 aaPredicted RBP8.19□□□□□ -1.1
CDH13-210ENST00000567445 FOXB2Q5VYV0 432 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 ZNF704Q6ZNC4 412 aaPredicted RBP8.19□□□□□ -1.1
CDH13-210ENST00000567445 ZBTB46Q86UZ6 589 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 ZNF527Q8NB42 609 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 LRRN4CLQ8ND94 238 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 OR7A2PQ8NGA2 310 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 RNF128Q8TEB7 428 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 TMEM171Q8WVE6 324 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 CPNE4Q96A23 557 aaPredicted RBP8.19□□□□□ -1.1
CDH13-210ENST00000567445 CHMP6Q96FZ7 201 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 PLPPR2Q96GM1 343 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 REXO5Q96IC2 774 aaKnown RBP8.19□□□□□ -1.1
CDH13-210ENST00000567445 APOPT1Q96IL0 206 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 PPP3R2Q96LZ3 170 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 HOXD1Q9GZZ0 328 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 TIGARQ9NQ88 270 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 MKS1Q9NXB0 559 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 SNX8Q9Y5X2 465 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 ACTL7BQ9Y614 415 aa8.19□□□□□ -1.1
CDH13-210ENST00000567445 GJE1A6NN92 205 aa8.18□□□□□ -1.1
CDH13-210ENST00000567445 H3BNH8 94 aa8.18□□□□□ -1.1
CDH13-210ENST00000567445 ZNF195O14628 629 aa8.18□□□□□ -1.1
CDH13-210ENST00000567445 HS3ST1O14792 307 aa8.18□□□□□ -1.1
CDH13-210ENST00000567445 EFNA2O43921 213 aa8.18□□□□□ -1.1
CDH13-210ENST00000567445 TMCC2O75069 709 aa8.18□□□□□ -1.1
CDH13-210ENST00000567445 PEX11AO75192 247 aa8.18□□□□□ -1.1
CDH13-210ENST00000567445 NUDT14O95848 222 aa8.18□□□□□ -1.1
CDH13-210ENST00000567445 PLAUP00749 431 aa8.18□□□□□ -1.1
CDH13-210ENST00000567445 PSMB1P20618 241 aaKnown RBP8.18□□□□□ -1.1
CDH13-210ENST00000567445 SHC1P29353 583 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms