RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 TRIM7Q9C029 511 aa6.88□□□□□ -1.31
NIFKP4-201ENST00000567275 TCEAL2Q9H3H9 227 aaPredicted RBP6.88□□□□□ -1.31
NIFKP4-201ENST00000567275 DNAJC11Q9NVH1 559 aa6.88□□□□□ -1.31
NIFKP4-201ENST00000567275 NEU3Q9UQ49 428 aa6.88□□□□□ -1.31
NIFKP4-201ENST00000567275 PTPN13Q12923 2485 aa6.88□□□□□ -1.31
NIFKP4-201ENST00000567275 A0A1W2PQ67 120 aa6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 KRT87PA6NCN2 255 aa6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 BUB1O43683 1085 aa6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 GLCEO94923 617 aa6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 UCHL3P15374 230 aa6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 DESP17661 470 aa6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 MAPK3P27361 379 aaPredicted RBP6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 MTIF2P46199 727 aaKnown RBP6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 NDST2P52849 883 aa6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 CCL7P80098 99 aa6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 TRA2AQ13595 282 aaKnown RBP eCLIP6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 CCDC14Q49A88 953 aa6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 C14orf28Q4W4Y0 310 aa6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 IFI44LQ53G44 452 aa6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 DOK6Q6PKX4 331 aa6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 C17orf82Q86X59 251 aaPredicted RBP6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 AQP12AQ8IXF9 295 aa6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 OR56A4Q8NGH8 313 aa6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 ZNF519Q8TB69 540 aa6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 AP2M1Q96CW1 435 aa6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 ZNF486Q96H40 463 aaPredicted RBP6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 CATSPER2Q96P56 530 aa6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 ATG101Q9BSB4 218 aa6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 APOOQ9BUR5 198 aa6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 NOCTQ9UK39 431 aaKnown RBP6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 SNX10Q9Y5X0 201 aa6.87□□□□□ -1.31
NIFKP4-201ENST00000567275 UBR5O95071 2799 aaPredicted RBP6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 F8VZ95 297 aa6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 CACNB4O00305 520 aaPredicted RBP6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 SNX3O60493 162 aa6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 CPNE6O95741 557 aa6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 SBK2P0C263 348 aa6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 KRT3P12035 628 aa6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 CYP2A7P20853 494 aa6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 TEAD1P28347 426 aa6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 IER3P46695 156 aa6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 RFTN1Q14699 578 aaPredicted RBP6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 TPD52L1Q16890 204 aaPredicted RBP6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 PRAMEF8Q5VWM4 474 aa6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 PPP1R2P3Q6NXS1 205 aa6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 Q6ZRP5 223 aa6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 CCDC112Q8NEF3 446 aa6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 OR6K2Q8NGY2 324 aa6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 RXFP2Q8WXD0 754 aa6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 TSACCQ96A04 125 aaPredicted RBP6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 PYCR2Q96C36 320 aa6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 ECHDC3Q96DC8 303 aa6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 CDKN2AIPNLQ96HQ2 116 aa6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 PANX3Q96QZ0 392 aa6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 TUBGCP2Q9BSJ2 902 aa6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 DDA1Q9BW61 102 aa6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 ABCG8Q9H221 673 aa6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 SYNDIG1Q9H7V2 258 aa6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 PISDQ9UG56 409 aa6.86□□□□□ -1.31
NIFKP4-201ENST00000567275 GOLGA8SH3BPF8 625 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 CALB1P05937 261 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 PRKAR1AP10644 381 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 PIK3R1P27986 724 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 CD86P42081 329 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 UBE2HP62256 183 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 ZNF74Q16587 644 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 DNAJC21Q5F1R6 531 aaKnown RBP6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 LRRC38Q5VT99 294 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 SPECC1LQ69YQ0 1117 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 FAM166AQ6J272 317 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 TAF8Q7Z7C8 310 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 ANKRD46Q86W74 232 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 MEX3DQ86XN8 651 aaKnown RBP6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 PHF13Q86YI8 300 aaPredicted RBP6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 OR10Q1Q8NGQ4 319 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 FAM172AQ8WUF8 416 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 GATAD1Q8WUU5 269 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 APOBEC4Q8WW27 367 aaKnown RBP6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 CKAP2Q8WWK9 683 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 PGM2Q96G03 612 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 PDXPQ96GD0 296 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 C4orf45Q96LM5 186 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 WRAP53Q9BUR4 548 aaKnown RBP6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 GSDMCQ9BYG8 508 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 XPO4Q9C0E2 1151 aaKnown RBP6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 LRRC19Q9H756 370 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 PDFQ9HBH1 243 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 RAB9BQ9NP90 201 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 PNPLA3Q9NST1 481 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 LHX3Q9UBR4 397 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 OR1A2Q9Y585 309 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 BOD1L1Q8NFC6 3051 aa6.85□□□□□ -1.31
NIFKP4-201ENST00000567275 ARHGAP42A6NI28 874 aa6.84□□□□□ -1.31
NIFKP4-201ENST00000567275 SIGLEC16A6NMB1 481 aa6.84□□□□□ -1.31
NIFKP4-201ENST00000567275 PSMD11O00231 422 aa6.84□□□□□ -1.31
NIFKP4-201ENST00000567275 ZSCAN5DPP0CG00 497 aa6.84□□□□□ -1.31
NIFKP4-201ENST00000567275 PNMA6AP0CW24 399 aaPredicted RBP6.84□□□□□ -1.31
NIFKP4-201ENST00000567275 CCNB1P14635 433 aa6.84□□□□□ -1.31
NIFKP4-201ENST00000567275 UGT1A4P22310 534 aa6.84□□□□□ -1.31
NIFKP4-201ENST00000567275 HSPA9P38646 679 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms