RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 CCDC120Q96HB5 630 aa23.62■■□□□ 1.37
NME3-209ENST00000566600 MRGPRX4Q96LA9 322 aa23.62■■□□□ 1.37
NME3-209ENST00000566600 HOPXQ9BPY8 73 aaPredicted RBP23.62■■□□□ 1.37
NME3-209ENST00000566600 CDHR4A6H8M9 788 aa23.61■■□□□ 1.37
NME3-209ENST00000566600 WIPF3A6NGB9 483 aa23.61■■□□□ 1.37
NME3-209ENST00000566600 CLDN24A6NM45 220 aa23.61■■□□□ 1.37
NME3-209ENST00000566600 H0Y3Z8 333 aa23.61■■□□□ 1.37
NME3-209ENST00000566600 SERPINB7O75635 380 aa23.61■■□□□ 1.37
NME3-209ENST00000566600 PABPC4LP0CB38 370 aaKnown RBP23.61■■□□□ 1.37
NME3-209ENST00000566600 UQCRBP14927 111 aa23.61■■□□□ 1.37
NME3-209ENST00000566600 ELK4P28324 431 aa23.61■■□□□ 1.37
NME3-209ENST00000566600 SMSP52788 366 aa23.61■■□□□ 1.37
NME3-209ENST00000566600 CLDN18P56856 261 aa23.61■■□□□ 1.37
NME3-209ENST00000566600 QPRTQ15274 297 aa23.61■■□□□ 1.37
NME3-209ENST00000566600 ZNF836Q6ZNA1 936 aa23.61■■□□□ 1.37
NME3-209ENST00000566600 GRAMD2AQ8IUY3 354 aa23.61■■□□□ 1.37
NME3-209ENST00000566600 RNF145Q96MT1 663 aa23.61■■□□□ 1.37
NME3-209ENST00000566600 DNAJB12Q9NXW2 375 aaKnown RBP23.61■■□□□ 1.37
NME3-209ENST00000566600 MYO7BQ6PIF6 2116 aa23.6■■□□□ 1.37
NME3-209ENST00000566600 TNFSF12-TNFSF13A0A0A6YY99 330 aa23.6■■□□□ 1.37
NME3-209ENST00000566600 PRORSD1PA6NEY8 169 aa23.6■■□□□ 1.37
NME3-209ENST00000566600 H3BML4 177 aa23.6■■□□□ 1.37
NME3-209ENST00000566600 PRKCAP17252 672 aa23.6■■□□□ 1.37
NME3-209ENST00000566600 ME2P23368 584 aa23.6■■□□□ 1.37
NME3-209ENST00000566600 PSMA4P25789 261 aaKnown RBP23.6■■□□□ 1.37
NME3-209ENST00000566600 EEF1A1P68104 462 aaKnown RBP23.6■■□□□ 1.37
NME3-209ENST00000566600 SRYQ05066 204 aa23.6■■□□□ 1.37
NME3-209ENST00000566600 SLC25A53Q5H9E4 307 aa23.6■■□□□ 1.37
NME3-209ENST00000566600 INTS11Q5TA45 600 aaKnown RBP23.6■■□□□ 1.37
NME3-209ENST00000566600 FAM91A1Q658Y4 838 aa23.6■■□□□ 1.37
NME3-209ENST00000566600 ZZZ3Q8IYH5 903 aa23.6■■□□□ 1.37
NME3-209ENST00000566600 BHLHE22Q8NFJ8 381 aaPredicted RBP23.6■■□□□ 1.37
NME3-209ENST00000566600 FBXO27Q8NI29 283 aa23.6■■□□□ 1.37
NME3-209ENST00000566600 KLHDC3Q9BQ90 382 aa23.6■■□□□ 1.37
NME3-209ENST00000566600 FAM215AQ9Y5M1 114 aa23.6■■□□□ 1.37
NME3-209ENST00000566600 SHISA8B8ZZ34 492 aa23.59■■□□□ 1.37
NME3-209ENST00000566600 ETV2O00321 342 aaPredicted RBP23.59■■□□□ 1.37
NME3-209ENST00000566600 BCAS1O75363 584 aaPredicted RBP23.59■■□□□ 1.37
NME3-209ENST00000566600 EPPINO95925 133 aa23.59■■□□□ 1.37
NME3-209ENST00000566600 PRKAR1BP31321 381 aa23.59■■□□□ 1.37
NME3-209ENST00000566600 PCGF2P35227 344 aa23.59■■□□□ 1.37
NME3-209ENST00000566600 NUDT2P50583 147 aa23.59■■□□□ 1.37
NME3-209ENST00000566600 GZMMP51124 257 aa23.59■■□□□ 1.37
NME3-209ENST00000566600 RAC1P63000 192 aa23.59■■□□□ 1.37
NME3-209ENST00000566600 FOXF1Q12946 379 aa23.59■■□□□ 1.37
NME3-209ENST00000566600 TOMM34Q15785 309 aaPredicted RBP23.59■■□□□ 1.37
NME3-209ENST00000566600 ACSF3Q4G176 576 aaPredicted RBP23.59■■□□□ 1.37
NME3-209ENST00000566600 RTL6Q6ICC9 239 aa23.59■■□□□ 1.37
NME3-209ENST00000566600 ERICH5Q6P6B1 374 aa23.59■■□□□ 1.37
NME3-209ENST00000566600 CALHM3Q86XJ0 350 aa23.59■■□□□ 1.37
NME3-209ENST00000566600 ZNF563Q8TA94 476 aa23.59■■□□□ 1.37
NME3-209ENST00000566600 POC1BQ8TC44 478 aa23.59■■□□□ 1.37
NME3-209ENST00000566600 SLC35B4Q969S0 331 aa23.59■■□□□ 1.37
NME3-209ENST00000566600 REXO5Q96IC2 774 aaKnown RBP23.59■■□□□ 1.37
NME3-209ENST00000566600 GPATCH1Q9BRR8 931 aaKnown RBP23.59■■□□□ 1.37
NME3-209ENST00000566600 TTYH2Q9BSA4 534 aa23.59■■□□□ 1.37
NME3-209ENST00000566600 DIDO1Q9BTC0 2240 aaKnown RBP23.58■■□□□ 1.37
NME3-209ENST00000566600 CFAP73A6NFT4 308 aa23.58■■□□□ 1.37
NME3-209ENST00000566600 FAAHO00519 579 aa23.58■■□□□ 1.37
NME3-209ENST00000566600 NDUFAB1O14561 156 aa23.58■■□□□ 1.37
NME3-209ENST00000566600 NTN1O95631 604 aa23.58■■□□□ 1.37
NME3-209ENST00000566600 RYKP34925 604 aa23.58■■□□□ 1.37
NME3-209ENST00000566600 PLAURQ03405 335 aa23.58■■□□□ 1.37
NME3-209ENST00000566600 VMACQ2NL98 169 aa23.58■■□□□ 1.37
NME3-209ENST00000566600 CHMP1BQ7LBR1 199 aa23.58■■□□□ 1.37
NME3-209ENST00000566600 ZNF550Q7Z398 422 aa23.58■■□□□ 1.37
NME3-209ENST00000566600 PATL1Q86TB9 770 aaKnown RBP23.58■■□□□ 1.37
NME3-209ENST00000566600 LACC1Q8IV20 430 aa23.58■■□□□ 1.37
NME3-209ENST00000566600 CALHM2Q9HA72 323 aa23.58■■□□□ 1.37
NME3-209ENST00000566600 ACER3Q9NUN7 267 aa23.58■■□□□ 1.37
NME3-209ENST00000566600 MED12Q93074 2177 aa23.57■■□□□ 1.36
NME3-209ENST00000566600 ZG16O60844 167 aa23.57■■□□□ 1.36
NME3-209ENST00000566600 GLI4P10075 376 aa23.57■■□□□ 1.36
NME3-209ENST00000566600 GP1BBP13224 206 aa23.57■■□□□ 1.36
NME3-209ENST00000566600 DLX5P56178 289 aa23.57■■□□□ 1.36
NME3-209ENST00000566600 PCBP3P57721 371 aaKnown RBP23.57■■□□□ 1.36
NME3-209ENST00000566600 SESN3P58005 492 aa23.57■■□□□ 1.36
NME3-209ENST00000566600 RPS3AP61247 264 aaKnown RBP23.57■■□□□ 1.36
NME3-209ENST00000566600 ADORA2A-AS1P86434 159 aa23.57■■□□□ 1.36
NME3-209ENST00000566600 PMPCAQ10713 525 aa23.57■■□□□ 1.36
NME3-209ENST00000566600 NSUN5P2Q63ZY6 315 aa23.57■■□□□ 1.36
NME3-209ENST00000566600 DHRS4L2Q6PKH6 230 aa23.57■■□□□ 1.36
NME3-209ENST00000566600 ARMC8Q8IUR7 673 aa23.57■■□□□ 1.36
NME3-209ENST00000566600 UBQLNLQ8IYU4 475 aa23.57■■□□□ 1.36
NME3-209ENST00000566600 MARVELD2Q8N4S9 558 aa23.57■■□□□ 1.36
NME3-209ENST00000566600 SMPDL3BQ92485 455 aa23.57■■□□□ 1.36
NME3-209ENST00000566600 RND1Q92730 232 aa23.57■■□□□ 1.36
NME3-209ENST00000566600 ZNF583Q96ND8 569 aa23.57■■□□□ 1.36
NME3-209ENST00000566600 TUBA1CQ9BQE3 449 aa23.57■■□□□ 1.36
NME3-209ENST00000566600 PIF1Q9H611 641 aa23.57■■□□□ 1.36
NME3-209ENST00000566600 RLIMQ9NVW2 624 aa23.57■■□□□ 1.36
NME3-209ENST00000566600 TAGLN3Q9UI15 199 aa23.57■■□□□ 1.36
NME3-209ENST00000566600 HEATR5AQ86XA9 2040 aa23.57■■□□□ 1.36
NME3-209ENST00000566600 BAHCC1Q9P281 2608 aa23.56■■□□□ 1.36
NME3-209ENST00000566600 PHF3Q92576 2039 aaKnown RBP23.56■■□□□ 1.36
NME3-209ENST00000566600 CD8B2A6NJW9 211 aa23.56■■□□□ 1.36
NME3-209ENST00000566600 GJE1A6NN92 205 aa23.56■■□□□ 1.36
NME3-209ENST00000566600 SEC14L5O43304 696 aa23.56■■□□□ 1.36
NME3-209ENST00000566600 AGAP20933 346 aa23.56■■□□□ 1.36
NME3-209ENST00000566600 AQP1P29972 269 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms