RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 FOXF1Q12946 379 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 SKP2Q13309 424 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 CBFBQ13951 182 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 TOMM34Q15785 309 aaPredicted RBP11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 TTMPQ5BVD1 217 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 HBMQ6B0K9 141 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 GTF2IRD2BQ6EKJ0 949 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 TYW3Q6IPR3 259 aaKnown RBP11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 VWA1Q6PCB0 445 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 FRRS1Q6ZNA5 592 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 ZNF621Q6ZSS3 439 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 EIF3MQ7L2H7 374 aaKnown RBP11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 FAM214BQ7L5A3 538 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 GTF2IRD2Q86UP8 949 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 RNF130Q86XS8 419 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 ZNF619Q8N2I2 560 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 FAM71CQ8NEG0 241 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 OR2V1Q8NHB1 315 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 FBXO27Q8NI29 283 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 LINC01560Q8TB33 94 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 LRRC8CQ8TDW0 803 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 ST8SIA1Q92185 356 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 OSTF1Q92882 214 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 ZNF524Q96C55 264 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 GMPPAQ96IJ6 420 aaPredicted RBP11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 KLHL15Q96M94 604 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 INPP5KQ9BT40 448 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 POLDIP3Q9BY77 421 aaKnown RBP11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 PRRG4Q9BZD6 226 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 TIGARQ9NQ88 270 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 PLSCR4Q9NRQ2 329 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 ARGLU1Q9NWB6 273 aaPredicted RBP11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 ELOVL5Q9NYP7 299 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 SLC35A3Q9Y2D2 325 aa11.33□□□□□ -0.6
LPCAT4-206ENST00000566581 HEATR1Q9H583 2144 aaKnown RBP11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 CENPVL1A0A0U1RR11 272 aa11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 PRAMEF27A3QJZ7 478 aa11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 HMGB1P1B2RPK0 211 aaPredicted RBP11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 TNFSF11O14788 317 aa11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 CXCL13O43927 109 aa11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 DIAPH2O60879 1101 aa11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 SMNDC1O75940 238 aaKnown RBP eCLIP11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 SYNGR4O95473 234 aa11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 KRT75O95678 551 aa11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 OPN1LWP04000 364 aa11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 PABPC4LP0CB38 370 aaKnown RBP11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 H2AFXP16104 143 aaPredicted RBP11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 PGM1P36871 562 aa11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 CD79BP40259 229 aa11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 POLR2JP52435 117 aaKnown RBP11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 QPRTQ15274 297 aa11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 MAPK14Q16539 360 aa11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 NDUFAF6Q330K2 333 aa11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 ZNF474Q6S9Z5 364 aaPredicted RBP11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 TMEM234Q8WY98 164 aa11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 CPNE4Q96A23 557 aaPredicted RBP11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 ZG16BQ96DA0 208 aa11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 GPATCH1Q9BRR8 931 aaKnown RBP11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 SLC39A3Q9BRY0 314 aa11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 THUMPD3Q9BV44 507 aaKnown RBP11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 TMEM185BQ9H7F4 350 aa11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 RMND5AQ9H871 391 aa11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 MTHFD2LQ9H903 347 aaPredicted RBP11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 SLCO1B3Q9NPD5 702 aa11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 NDRG3Q9UGV2 375 aa11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 EMC9Q9Y3B6 208 aa11.32□□□□□ -0.6
LPCAT4-206ENST00000566581 FAM234BA2RU67 622 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 SH3D21A4FU49 640 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 SS18L1O75177 396 aaPredicted RBP11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 H6PDO95479 791 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 C1QCP02747 245 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 GSNP06396 782 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 PGCP20142 388 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 SHC1P29353 583 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 SFTPDP35247 375 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 RNF144AP50876 292 aaPredicted RBP11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 MVDP53602 400 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 SESN3P58005 492 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 SIRPAP78324 504 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 IRX1P78414 480 aaPredicted RBP11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 KCNJ10P78508 379 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 HPCAP84074 193 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 FAM27E3Q08E93 113 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 SELENBP1Q13228 472 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 TESK1Q15569 626 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 TMEM176BQ3YBM2 270 aaPredicted RBP11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 GPAT3Q53EU6 434 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 LRRC74BQ6ZQY2 392 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 OLIG3Q7RTU3 272 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 CMIPQ8IY22 773 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 MIER2Q8N344 545 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 TMCO5AQ8N6Q1 288 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 GOLGA6L1Q8N7Z2 621 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 ZNF610Q8N9Z0 462 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 OR6K3Q8NGY3 331 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 RFWD2Q8NHY2 731 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 ZFP90Q8TF47 636 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 ITCHQ96J02 903 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 MARK4Q96L34 752 aa11.31□□□□□ -0.6
LPCAT4-206ENST00000566581 OPN3Q9H1Y3 402 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms