RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 KCNJ10P78508 379 aa12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 PLAURQ03405 335 aa12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 SKP2Q13309 424 aa12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 CYLC2Q14093 348 aaPredicted RBP12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 SELPLGQ14242 412 aa12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 CAPRIN1Q14444 709 aaKnown RBP12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 TRMT5Q32P41 509 aaKnown RBP12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 PLPPR5Q32ZL2 321 aa12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 COQ5Q5HYK3 327 aa12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 RPS26P11Q5JNZ5 115 aaPredicted RBP12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 GCNT6Q5T4J0 391 aa12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 REP15Q6BDI9 236 aa12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 PIGWQ7Z7B1 504 aa12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 UBQLNLQ8IYU4 475 aa12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 GTPBP8Q8N3Z3 284 aaPredicted RBP12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 NAXEQ8NCW5 288 aa12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 FAM71CQ8NEG0 241 aa12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 GPR119Q8TDV5 335 aa12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 WNT2BQ93097 391 aa12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 MARVELD3Q96A59 401 aa12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 ZNF524Q96C55 264 aa12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 ARSGQ96EG1 525 aa12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 ZFP3Q96NJ6 502 aa12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 TM9SF2Q99805 663 aa12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 TREX2Q9BQ50 279 aaPredicted RBP12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 CCDC106Q9BWC9 280 aa12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 MYLK2Q9H1R3 596 aa12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 SLC35A3Q9Y2D2 325 aa12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 ITPR2Q14571 2701 aa12.47□□□□□ -0.41
HERPUD1-210ENST00000565966 ADGRG4Q8IZF6 3080 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 A0A0G2JPF8 293 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 HNRNPCL2B2RXH8 293 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 HNRNPCL3B7ZW38 293 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 FXYD1O00168 92 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 HNRNPCL1O60812 293 aaKnown RBP12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 DNAJA2O60884 412 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 CYP7B1O75881 506 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 RCBTB2O95199 551 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 NUDT14O95848 222 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 DBIP07108 87 aaKnown RBP12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 LINGO3P0C6S8 592 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 UBTFL6P0CB48 400 aaPredicted RBP12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 HNRNPCL4P0DMR1 293 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 CTSSP25774 331 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 EIF1P41567 113 aaKnown RBP12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 ZNF136P52737 540 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 SUCLG1P53597 346 aaKnown RBP12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 CLDN15P56746 228 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 MTPNP58546 118 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 RPS3AP61247 264 aaKnown RBP12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 TFF3Q07654 80 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 GNA13Q14344 377 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 TOMM34Q15785 309 aaPredicted RBP12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 ADRM1Q16186 407 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 MMEL1Q495T6 779 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 PRAMEF8Q5VWM4 474 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 PRAMEF7Q5VXH5 474 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 TREML1Q86YW5 311 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 GRAMD2AQ8IUY3 354 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 PEX5LQ8IYB4 626 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 TMCO5AQ8N6Q1 288 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 METTL25Q8N6Q8 603 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 POU5F2Q8N7G0 328 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 C9orf106Q8NAJ2 232 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 TOR1AIP2Q8NFQ8 470 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 OR52P1PQ8NH57 321 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 OR5W2Q8NH69 310 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 NFKBIDQ8NI38 313 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 RP9Q8TA86 221 aaKnown RBP12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 POC1BQ8TC44 478 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 WDR60Q8WVS4 1066 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 LRRC58Q96CX6 371 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 SPOCK3Q9BQ16 436 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 THUMPD3Q9BV44 507 aaKnown RBP12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 ENKD1Q9H0I2 346 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 TMEM38AQ9H6F2 299 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 BCL2L10Q9HD36 194 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 CLCF1Q9UBD9 225 aa12.46□□□□□ -0.41
HERPUD1-210ENST00000565966 SEC14L5O43304 696 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 PGM3O95394 542 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 IL18BPO95998 194 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 NPPAP01160 153 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 TMIGD3P0DMS9 266 aaPredicted RBP12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 COX4I1P13073 169 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 NID1P14543 1247 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 IL7RP16871 459 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 BMP5P22003 454 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 PSMA4P25789 261 aaKnown RBP12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 ADH6P28332 368 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 OPRM1P35372 400 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 CCR4P51679 360 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 CLDN20P56880 219 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 RAC1P63000 192 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 CDK6Q00534 326 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 FOXF1Q12946 379 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 CBFBQ13951 182 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 MRPL2Q5T653 305 aaKnown RBP12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 NANOGP8Q6NSW7 305 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 POMZP3Q6PJE2 187 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 P4HA3Q7Z4N8 544 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms