RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 ZNF674Q2M3X9 581 aa12.77□□□□□ -0.37
CX3CL1-204ENST00000565912 TMEM244Q5VVB8 128 aa12.77□□□□□ -0.37
CX3CL1-204ENST00000565912 NIPAL3Q6P499 406 aa12.77□□□□□ -0.37
CX3CL1-204ENST00000565912 VHLLQ6RSH7 139 aa12.77□□□□□ -0.37
CX3CL1-204ENST00000565912 TPRA1Q86W33 373 aa12.77□□□□□ -0.37
CX3CL1-204ENST00000565912 DEDD2Q8WXF8 326 aa12.77□□□□□ -0.37
CX3CL1-204ENST00000565912 FGF13Q92913 245 aa12.77□□□□□ -0.37
CX3CL1-204ENST00000565912 NT5C3BQ969T7 300 aa12.77□□□□□ -0.37
CX3CL1-204ENST00000565912 C19orf12Q9NSK7 152 aa12.77□□□□□ -0.37
CX3CL1-204ENST00000565912 CEBPZOSA8MTT3 80 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 BOLA2-SMG1P6H3BVE0 249 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 CTSCP53634 463 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 CTBSQ01459 385 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 RIPPLY1Q0D2K3 151 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 CDK5R2Q13319 367 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 FGFBP1Q14512 234 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 ARHGAP19Q14CB8 494 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 ACSM3Q53FZ2 586 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 EID2Q8N6I1 236 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 MSI2Q96DH6 328 aaKnown RBP12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 ZNF845Q96IR2 970 aaPredicted RBP12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 BIRC8Q96P09 236 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 MYADMQ96S97 322 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 SAP130Q9H0E3 1048 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 CNOT11Q9UKZ1 510 aaKnown RBP12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 CACNG2Q9Y698 323 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 D6RAR5 112 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 TMX2-CTNND1H3BSU7 103 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 ARPC1BO15143 372 aaKnown RBP12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 ZFAND5O76080 213 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 CD6P30203 668 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 HOXA9P31269 272 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 RPL23AP62750 156 aaKnown RBP12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 DEFB103AP81534 67 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 SSX2Q16385 188 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 PROX2Q3B8N5 592 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 METTL11BQ5VVY1 283 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 CPZQ66K79 652 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 SLC15A4Q8N697 577 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 GPR150Q8NGU9 434 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 ELMOD3Q96FG2 381 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 PGAP3Q96FM1 320 aaPredicted RBP12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 KLF16Q9BXK1 252 aaPredicted RBP12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 SDHAF2Q9NX18 166 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 GABRR3A8MPY1 467 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 CER1O95813 267 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 BMP2P12643 396 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 PSMB5P28074 263 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 HTRA3P83110 453 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 ZNF252P-AS1Q0IIN9 211 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 ESCO2Q56NI9 601 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 TAAR8Q969N4 342 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 ARL11Q969Q4 196 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 DCBLD2Q96PD2 775 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 SNX18Q96RF0 628 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 LMF2Q9BU23 707 aaKnown RBP12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 SMIM3Q9BZL3 60 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 SLAMF7Q9NQ25 335 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 SDR39U1Q9NRG7 319 aaPredicted RBP12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 GNG13Q9P2W3 67 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 CA5BQ9Y2D0 317 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 CD38P28907 300 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 SSTR4P31391 388 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 WNT7BP56706 349 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 ZP2Q05996 745 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 GK2Q14410 553 aaPredicted RBP12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 LTC4SQ16873 150 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 TLDC1Q6P9B6 456 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 FAM43BQ6ZT52 329 aaPredicted RBP12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 NCCRP1Q6ZVX7 275 aaPredicted RBP12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 PIANPQ8IYJ0 282 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 ESX1Q8N693 406 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 MMP28Q9H239 520 aa12.76□□□□□ -0.37
CX3CL1-204ENST00000565912 TRAPPC2LH3BP13 241 aa12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 SPOCK1Q08629 439 aa12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 TAS1R1Q7RTX1 841 aa12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 SLC39A11Q8N1S5 342 aa12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 LRRC18Q8N456 261 aa12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 ZNF775Q96BV0 537 aaPredicted RBP12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 MUCL1Q96DR8 90 aa12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 C4orf36Q96KX1 117 aa12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 PRRC1Q96M27 445 aa12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 ULBP2Q9BZM5 246 aa12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 PRSS21Q9Y6M0 314 aa12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 KAT6AQ92794 2004 aa12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 CD46P15529 392 aa12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 OR1D4P47884 311 aa12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 ATP1B3P54709 279 aa12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 WDR5P61964 334 aaKnown RBP12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 POU3F1Q03052 451 aaPredicted RBP12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 VEZF1Q14119 521 aa12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 PLAG1Q6DJT9 500 aa12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 VASNQ6EMK4 673 aa12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 VRK2Q86Y07 508 aa12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 ZNF679Q8IYX0 411 aa12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 RAB39BQ96DA2 213 aa12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 RSPRY1Q96DX4 576 aa12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 PRDM9Q9NQV7 894 aa12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 SLC6A5Q9Y345 797 aa12.75□□□□□ -0.37
CX3CL1-204ENST00000565912 PCDHGA1Q9Y5H4 931 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms