RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 CNR1P21554 472 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 ZP3P21754 424 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 CD82P27701 267 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 LAP3P28838 519 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 GJB2P29033 226 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 RBMS1P29558 406 aaKnown RBP2.83□□□□□ -1.96
CHD9-216ENST00000565803 CALCRP30988 508 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 AVPR1AP37288 418 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 LIPAP38571 399 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 RASSF2P50749 326 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 DAP3P51398 398 aaKnown RBP2.83□□□□□ -1.96
CHD9-216ENST00000565803 SLC37A1P57057 533 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 CLDN2P57739 230 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 PPIAP62937 165 aaKnown RBP2.83□□□□□ -1.96
CHD9-216ENST00000565803 RAE1P78406 368 aaKnown RBP2.83□□□□□ -1.96
CHD9-216ENST00000565803 EGR3Q06889 387 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 RBBP4Q09028 425 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 HYAL1Q12794 435 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 BNIP2Q12982 314 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 TRIP13Q15645 432 aaPredicted RBP2.83□□□□□ -1.96
CHD9-216ENST00000565803 GPR33Q49SQ1 333 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 BRMS1LQ5PSV4 323 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 OGFRL1Q5TC84 451 aaPredicted RBP2.83□□□□□ -1.96
CHD9-216ENST00000565803 C9orf135Q5VTT2 229 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 SLX4IPQ5VYV7 408 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 OR4F3Q6IEY1 312 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 LRRC8BQ6P9F7 803 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.83□□□□□ -1.96
CHD9-216ENST00000565803 QSOX2Q6ZRP7 698 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 FAM214BQ7L5A3 538 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 CXXC5Q7LFL8 322 aaKnown RBP2.83□□□□□ -1.96
CHD9-216ENST00000565803 UNC93AQ86WB7 457 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 SHISA5Q8N114 240 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 Q8N402 240 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 MFSD4AQ8N468 514 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 HORMAD2Q8N7B1 307 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 TMEM105Q8N8V8 129 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 BOLLQ8N9W6 283 aaKnown RBP2.83□□□□□ -1.96
CHD9-216ENST00000565803 NLGN4YQ8NFZ3 816 aaPredicted RBP2.83□□□□□ -1.96
CHD9-216ENST00000565803 OR13C5Q8NGS8 318 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 SLC25A28Q96A46 364 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 ISOC2Q96AB3 205 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 PPWD1Q96BP3 646 aaKnown RBP2.83□□□□□ -1.96
CHD9-216ENST00000565803 TCEAL4Q96EI5 215 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 CPNE2Q96FN4 548 aaPredicted RBP2.83□□□□□ -1.96
CHD9-216ENST00000565803 ZNF582Q96NG8 517 aaPredicted RBP2.83□□□□□ -1.96
CHD9-216ENST00000565803 MUS81Q96NY9 551 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 ZIM3Q96PE6 472 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 BARHL1Q9BZE3 327 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 TOLLIPQ9H0E2 274 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 RETNQ9HD89 108 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 MLXIPLQ9NP71 852 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 ZDHHC4Q9NPG8 344 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 KRCC1Q9NPI7 259 aaPredicted RBP2.83□□□□□ -1.96
CHD9-216ENST00000565803 IMP3Q9NV31 184 aaKnown RBP2.83□□□□□ -1.96
CHD9-216ENST00000565803 SPHK1Q9NYA1 384 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 FBLN5Q9UBX5 448 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 NXT1Q9UKK6 140 aaKnown RBP2.83□□□□□ -1.96
CHD9-216ENST00000565803 RAI2Q9Y5P3 530 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 TAF6LQ9Y6J9 622 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 ZFHX2Q9C0A1 2572 aaPredicted RBP2.83□□□□□ -1.96
CHD9-216ENST00000565803 A0A1W2PPQ1 181 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 FITM1A5D6W6 292 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 C3orf70A6NLC5 250 aaPredicted RBP2.83□□□□□ -1.96
CHD9-216ENST00000565803 BLOC1S5-TXNDC5H3BN57 136 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 H3BNH8 94 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 hCG_2039718K7EN88 272 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 M0R036 132 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 M0R3G1 203 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 NXPH2O95156 264 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 GLRA1P23415 457 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 CXCR2P25025 360 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 SSTR2P30874 369 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 GPR1P46091 355 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 CYP2J2P51589 502 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 FOXL2P58012 376 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 NAA20P61599 178 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 POLR2LP62875 67 aaKnown RBP2.83□□□□□ -1.96
CHD9-216ENST00000565803 ADORA2A-AS1P86434 159 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 TRAF3Q13114 568 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 ITGA9Q13797 1035 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 ENPP2Q13822 863 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 OR4D1Q15615 310 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 INPP5JQ15735 1006 aaPredicted RBP2.83□□□□□ -1.96
CHD9-216ENST00000565803 TNXAQ16473 311 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 C18orf21Q32NC0 220 aaPredicted RBP2.83□□□□□ -1.96
CHD9-216ENST00000565803 PAN3Q58A45 887 aaKnown RBP2.83□□□□□ -1.96
CHD9-216ENST00000565803 ZNF542PQ5EBM4 170 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 ARMCX4Q5H9R4 360 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 RABL3Q5HYI8 236 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 FAM71F2Q6NXP2 309 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 RFWD3Q6PCD5 774 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 WDR53Q7Z5U6 358 aaPredicted RBP2.83□□□□□ -1.96
CHD9-216ENST00000565803 GPR141Q7Z602 305 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 DHDDSQ86SQ9 333 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 GPBP1Q86WP2 473 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 WFDC3Q8IUB2 231 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 DMRTC2Q8IXT2 367 aaPredicted RBP2.83□□□□□ -1.96
CHD9-216ENST00000565803 EID3Q8N140 333 aa2.83□□□□□ -1.96
CHD9-216ENST00000565803 SLC44A5Q8NCS7 719 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms