RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ING4Q9UNL4 249 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 SPACA6W5XKT8 324 aa12.13□□□□□ -0.47
USB1-207ENST00000563149 MDC1Q14676 2089 aaKnown RBP12.12□□□□□ -0.47
USB1-207ENST00000563149 PRSS38A1L453 326 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 DVL2O14641 736 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 FZD7O75084 574 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 REM1O75628 298 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 PAHP00439 452 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 IFNGP01579 166 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 GUSBP08236 651 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 RAB3BP20337 219 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 DRD5P21918 477 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 MAP3K8P41279 467 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 HTR2BP41595 481 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 RBM34P42696 430 aaKnown RBP12.12□□□□□ -0.47
USB1-207ENST00000563149 RAG2P55895 527 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 CLDN2P57739 230 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 SIM1P81133 766 aaPredicted RBP12.12□□□□□ -0.47
USB1-207ENST00000563149 ZNF85Q03923 595 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 NTRK2Q16620 822 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 TRMT12Q53H54 448 aaKnown RBP12.12□□□□□ -0.47
USB1-207ENST00000563149 CCNJQ5T5M9 372 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 LAMTOR1Q6IAA8 161 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 B3GLCTQ6Y288 498 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 CDH24Q86UP0 819 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 YAF2Q8IY57 180 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 GPR135Q8IZ08 494 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 COX18Q8N8Q8 333 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 OR14C36Q8NHC7 312 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 ANGPTL6Q8NI99 470 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 SMPDL3BQ92485 455 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 RSC1A1Q92681 617 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 SCMH1Q96GD3 660 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 C4orf36Q96KX1 117 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 PGLYRP3Q96LB9 341 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 GFM1Q96RP9 751 aaKnown RBP12.12□□□□□ -0.47
USB1-207ENST00000563149 HCAR1Q9BXC0 346 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 ENKD1Q9H0I2 346 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 MED28Q9H204 178 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 ERVMER34-1Q9H9K5 563 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 ADGRL4Q9HBW9 690 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 C20orf141Q9NUB4 165 aa12.12□□□□□ -0.47
USB1-207ENST00000563149 A0A0A6YYJ9 748 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 CENPVL1A0A0U1RR11 272 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 ZC3H12DA2A288 527 aaKnown RBP12.11□□□□□ -0.47
USB1-207ENST00000563149 J3QLW9 94 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 OGG1O15527 345 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 CHP2O43745 196 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 LANCL1O43813 399 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 BRINP1O60477 761 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 RFPL3O75679 317 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 UBL3O95164 117 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 GKN3PP0CG01 181 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 ZNF19P17023 458 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 STOMP27105 288 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 SLC6A6P31641 620 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 MMP15P51511 669 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 POU6F2P78424 691 aaPredicted RBP12.11□□□□□ -0.47
USB1-207ENST00000563149 SLC3A1Q07837 685 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 CCDC85BQ15834 202 aaPredicted RBP12.11□□□□□ -0.47
USB1-207ENST00000563149 ACSM3Q53FZ2 586 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 CD276Q5ZPR3 534 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 ARHGAP11AQ6P4F7 1023 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 THSD4Q6ZMP0 1018 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 RTL4Q6ZR62 310 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 ASB18Q6ZVZ8 466 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 GRAMD2AQ8IUY3 354 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 FLVCR1-AS1Q8TAF5 88 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 ZFPM2Q8WW38 1151 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 SNAPC3Q92966 411 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 OR2M2Q96R28 347 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 IRF2BPLQ9H1B7 796 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 OR51V1Q9H2C8 321 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 PPIL3Q9H2H8 161 aaKnown RBP12.11□□□□□ -0.47
USB1-207ENST00000563149 FGF22Q9HCT0 170 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 ADAP2Q9NPF8 381 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 TBC1D29Q9UFV1 150 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 ZMIZ1Q9ULJ6 1067 aa12.11□□□□□ -0.47
USB1-207ENST00000563149 SLC9B1P1A6NJY1 282 aa12.1□□□□□ -0.47
USB1-207ENST00000563149 E9PI62 339 aa12.1□□□□□ -0.47
USB1-207ENST00000563149 ERVH48-1M5A8F1 160 aa12.1□□□□□ -0.47
USB1-207ENST00000563149 CTDSPLO15194 276 aa12.1□□□□□ -0.47
USB1-207ENST00000563149 HYAL3O43820 417 aaPredicted RBP12.1□□□□□ -0.47
USB1-207ENST00000563149 TMEM127O75204 238 aa12.1□□□□□ -0.47
USB1-207ENST00000563149 ARL6IP5O75915 188 aa12.1□□□□□ -0.47
USB1-207ENST00000563149 SAGP10523 405 aaPredicted RBP12.1□□□□□ -0.47
USB1-207ENST00000563149 EVI2BP34910 448 aa12.1□□□□□ -0.47
USB1-207ENST00000563149 BTCP35070 178 aa12.1□□□□□ -0.47
USB1-207ENST00000563149 TNFRSF4P43489 277 aa12.1□□□□□ -0.47
USB1-207ENST00000563149 E2F1Q01094 437 aa12.1□□□□□ -0.47
USB1-207ENST00000563149 CAMK2BQ13554 666 aa12.1□□□□□ -0.47
USB1-207ENST00000563149 ZSWIM7Q19AV6 140 aa12.1□□□□□ -0.47
USB1-207ENST00000563149 DEFB134Q4QY38 66 aa12.1□□□□□ -0.47
USB1-207ENST00000563149 MANEAQ5SRI9 462 aa12.1□□□□□ -0.47
USB1-207ENST00000563149 FIGLAQ6QHK4 219 aa12.1□□□□□ -0.47
USB1-207ENST00000563149 OR4N5Q8IXE1 308 aa12.1□□□□□ -0.47
USB1-207ENST00000563149 SYS1Q8N2H4 156 aa12.1□□□□□ -0.47
USB1-207ENST00000563149 CADM2Q8N3J6 435 aa12.1□□□□□ -0.47
USB1-207ENST00000563149 OR13C2Q8NGS9 318 aa12.1□□□□□ -0.47
USB1-207ENST00000563149 ZCCHC10Q8TBK6 192 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms