RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 C9JVG2 144 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 OVOL3O00110 214 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 PIP5K1BO14986 540 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 CFLARO15519 480 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 TRIM13O60858 407 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 PEX11AO75192 247 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 CYP7B1O75881 506 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 SOX30O94993 753 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 DANCRP0C864 163 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 LAMP1P11279 417 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 UBL4AP11441 157 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 PRKCAP17252 672 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 SOAT1P35610 550 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 ATP12AP54707 1039 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 CBFBQ13951 182 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 PCLAFQ15004 111 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 MLC1Q15049 377 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 PPA1Q15181 289 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 KLHL26Q53HC5 615 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 EXOSC6Q5RKV6 272 aaKnown RBP11.52□□□□□ -0.57
SF3B3-202ENST00000562722 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.52□□□□□ -0.57
SF3B3-202ENST00000562722 HMBOX1Q6NT76 420 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.52□□□□□ -0.57
SF3B3-202ENST00000562722 ZNF100Q8IYN0 542 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 PIWIL2Q8TC59 973 aaKnown RBP11.52□□□□□ -0.57
SF3B3-202ENST00000562722 GPR119Q8TDV5 335 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 OR5P2Q8WZ92 322 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 ZNF775Q96BV0 537 aaPredicted RBP11.52□□□□□ -0.57
SF3B3-202ENST00000562722 MUCL1Q96DR8 90 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 MRGPRX4Q96LA9 322 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 PPP3R2Q96LZ3 170 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 OR5B2Q96R09 309 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 C1orf50Q9BV19 199 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 CXorf36Q9H7Y0 433 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 ANKZF1Q9H8Y5 726 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 BARX1Q9HBU1 254 aaPredicted RBP11.52□□□□□ -0.57
SF3B3-202ENST00000562722 EML4Q9HC35 981 aaKnown RBP11.52□□□□□ -0.57
SF3B3-202ENST00000562722 ATAD3AQ9NVI7 634 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 CISD1Q9NZ45 108 aaKnown RBP11.52□□□□□ -0.57
SF3B3-202ENST00000562722 ATP6V1HQ9UI12 483 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 PRSS50Q9UI38 385 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 DTNAQ9Y4J8 743 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 TRAF6Q9Y4K3 522 aa11.52□□□□□ -0.57
SF3B3-202ENST00000562722 DPRXA6NFQ7 191 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 ZNF814B7Z6K7 855 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 ZNF264O43296 627 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 ADAM11O75078 769 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 C6orf47O95873 294 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 IFNA2P01563 188 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 IGHV4-39P01824 125 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 CHRNGP07510 517 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 OR3A2P47893 321 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 CDH11P55287 796 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 C21orf58P58505 322 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 RAC3P60763 192 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 RASGEF1BQ0VAM2 473 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 PTGR1Q14914 329 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 QPRTQ15274 297 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 LSM12Q3MHD2 195 aaKnown RBP11.51□□□□□ -0.57
SF3B3-202ENST00000562722 ATP6AP1LQ52LC2 224 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 C3orf33Q6P1S2 294 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 RNF165Q6ZSG1 346 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 Q6ZT83 130 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 OR5W2Q8NH69 310 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 OR5AK3PQ8NH89 298 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 KIF18AQ8NI77 898 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 EPS8L3Q8TE67 593 aaKnown RBP11.51□□□□□ -0.57
SF3B3-202ENST00000562722 PRPF18Q99633 342 aaKnown RBP11.51□□□□□ -0.57
SF3B3-202ENST00000562722 PSD2Q9BQI7 771 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 TRIM2Q9C040 744 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 PPCSQ9HAB8 311 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 GDF2Q9UK05 429 aaPredicted RBP11.51□□□□□ -0.57
SF3B3-202ENST00000562722 KCNE3Q9Y6H6 103 aa11.51□□□□□ -0.57
SF3B3-202ENST00000562722 FBN3Q75N90 2809 aa11.5□□□□□ -0.57
SF3B3-202ENST00000562722 ANK3Q12955 4377 aaKnown RBP11.5□□□□□ -0.57
SF3B3-202ENST00000562722 RNF212BA8MTL3 300 aa11.5□□□□□ -0.57
SF3B3-202ENST00000562722 TLX2O43763 284 aaPredicted RBP11.5□□□□□ -0.57
SF3B3-202ENST00000562722 CD5LO43866 347 aa11.5□□□□□ -0.57
SF3B3-202ENST00000562722 SSX4O60224 188 aa11.5□□□□□ -0.57
SF3B3-202ENST00000562722 RAMP1O60894 148 aa11.5□□□□□ -0.57
SF3B3-202ENST00000562722 NDUFS7O75251 213 aa11.5□□□□□ -0.57
SF3B3-202ENST00000562722 SLU7O95391 586 aaKnown RBP11.5□□□□□ -0.57
SF3B3-202ENST00000562722 GGT1P19440 569 aa11.5□□□□□ -0.57
SF3B3-202ENST00000562722 PTNP21246 168 aa11.5□□□□□ -0.57
SF3B3-202ENST00000562722 GPR68Q15743 365 aa11.5□□□□□ -0.57
SF3B3-202ENST00000562722 PGGHGQ32M88 737 aa11.5□□□□□ -0.57
SF3B3-202ENST00000562722 TIGD2Q4W5G0 525 aa11.5□□□□□ -0.57
SF3B3-202ENST00000562722 ARL13AQ5H913 290 aaPredicted RBP11.5□□□□□ -0.57
SF3B3-202ENST00000562722 PDZK1Q5T2W1 519 aa11.5□□□□□ -0.57
SF3B3-202ENST00000562722 HOMEZQ8IX15 550 aa11.5□□□□□ -0.57
SF3B3-202ENST00000562722 UBE2J2Q8N2K1 259 aa11.5□□□□□ -0.57
SF3B3-202ENST00000562722 NATD1Q8N6N6 113 aa11.5□□□□□ -0.57
SF3B3-202ENST00000562722 FNDC5Q8NAU1 212 aa11.5□□□□□ -0.57
SF3B3-202ENST00000562722 OR5D16Q8NGK9 328 aa11.5□□□□□ -0.57
SF3B3-202ENST00000562722 MOAP1Q96BY2 351 aa11.5□□□□□ -0.57
SF3B3-202ENST00000562722 ZNF300Q96RE9 604 aaPredicted RBP11.5□□□□□ -0.57
SF3B3-202ENST00000562722 TRAF4Q9BUZ4 470 aaPredicted RBP11.5□□□□□ -0.57
SF3B3-202ENST00000562722 QRSL1Q9H0R6 528 aaKnown RBP11.5□□□□□ -0.57
SF3B3-202ENST00000562722 BCO1Q9HAY6 547 aa11.5□□□□□ -0.57
SF3B3-202ENST00000562722 SERINC1Q9NRX5 453 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms