RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 GSSP48637 474 aa13.07□□□□□ -0.32
COMMD4-205ENST00000562310 SSR4P51571 173 aa13.07□□□□□ -0.32
COMMD4-205ENST00000562310 MLF1P58340 268 aa13.07□□□□□ -0.32
COMMD4-205ENST00000562310 FOXK2Q01167 660 aa13.07□□□□□ -0.32
COMMD4-205ENST00000562310 ZNF117Q03924 483 aa13.07□□□□□ -0.32
COMMD4-205ENST00000562310 FOXD4Q12950 439 aaPredicted RBP13.07□□□□□ -0.32
COMMD4-205ENST00000562310 TSPAN31Q12999 210 aa13.07□□□□□ -0.32
COMMD4-205ENST00000562310 ALG10BQ5I7T1 473 aa13.07□□□□□ -0.32
COMMD4-205ENST00000562310 ZNF691Q5VV52 312 aa13.07□□□□□ -0.32
COMMD4-205ENST00000562310 TMEM81Q6P7N7 255 aa13.07□□□□□ -0.32
COMMD4-205ENST00000562310 KLHL17Q6TDP4 642 aa13.07□□□□□ -0.32
COMMD4-205ENST00000562310 C16orf47Q6ZP98 133 aaPredicted RBP13.07□□□□□ -0.32
COMMD4-205ENST00000562310 THAP5Q7Z6K1 395 aa13.07□□□□□ -0.32
COMMD4-205ENST00000562310 MARCH3Q86UD3 253 aa13.07□□□□□ -0.32
COMMD4-205ENST00000562310 RPS19BP1Q86WX3 136 aaKnown RBP13.07□□□□□ -0.32
COMMD4-205ENST00000562310 CADM2Q8N3J6 435 aa13.07□□□□□ -0.32
COMMD4-205ENST00000562310 ADAMTS17Q8TE56 1095 aa13.07□□□□□ -0.32
COMMD4-205ENST00000562310 GRHL3Q8TE85 626 aa13.07□□□□□ -0.32
COMMD4-205ENST00000562310 TMEM255BQ8WV15 326 aa13.07□□□□□ -0.32
COMMD4-205ENST00000562310 TMEM239Q8WW34 195 aa13.07□□□□□ -0.32
COMMD4-205ENST00000562310 ASB15Q8WXK1 588 aa13.07□□□□□ -0.32
COMMD4-205ENST00000562310 GATA6Q92908 595 aa13.07□□□□□ -0.32
COMMD4-205ENST00000562310 HRASLS5Q96KN8 279 aa13.07□□□□□ -0.32
COMMD4-205ENST00000562310 ING2Q9H160 280 aa13.07□□□□□ -0.32
COMMD4-205ENST00000562310 DLL3Q9NYJ7 618 aa13.07□□□□□ -0.32
COMMD4-205ENST00000562310 NDRG4Q9ULP0 352 aaKnown RBP13.07□□□□□ -0.32
COMMD4-205ENST00000562310 MED31Q9Y3C7 131 aa13.07□□□□□ -0.32
COMMD4-205ENST00000562310 HEATR5AQ86XA9 2040 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 RIF1Q5UIP0 2472 aaKnown RBP13.06□□□□□ -0.32
COMMD4-205ENST00000562310 OIP5O43482 229 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 ZNF354AO60765 605 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-205ENST00000562310 ADAM11O75078 769 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 OR6B1O95007 311 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 LYNP07948 512 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 CELA2AP08217 269 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 POU2F1P14859 743 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 RYKP34925 604 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 OMPP47874 163 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 P2RX1P51575 399 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 C17orf67Q0P5P2 114 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 SNTA1Q13424 505 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 ATP1A4Q13733 1029 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 CBFBQ13951 182 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 RTP5Q14D33 572 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 ZNF791Q3KP31 576 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-205ENST00000562310 H3F3CQ6NXT2 135 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 ZER1Q7Z7L7 766 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 NRMQ8IXM6 262 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 GPALPP1Q8IXQ4 340 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 CDK20Q8IZL9 346 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 DEPDC4Q8N2C3 294 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 OR5W2Q8NH69 310 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 B4GALNT2Q8NHY0 566 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 RNF217Q8TC41 542 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 NXPE2Q96DL1 559 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 ARSGQ96EG1 525 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 MUS81Q96NY9 551 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 NODALQ96S42 347 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 ZNF426Q9BUY5 554 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 YTHDF1Q9BYJ9 559 aaKnown RBP13.06□□□□□ -0.32
COMMD4-205ENST00000562310 SLC19A3Q9BZV2 496 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 ZNF696Q9H7X3 374 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 METTL7AQ9H8H3 244 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 KLRF1Q9NZS2 232 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 REV1Q9UBZ9 1251 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 ICAM5Q9UMF0 924 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 PCDHGB6Q9Y5F9 930 aa13.06□□□□□ -0.32
COMMD4-205ENST00000562310 ZFHX2Q9C0A1 2572 aaPredicted RBP13.05□□□□□ -0.32
COMMD4-205ENST00000562310 IGLV3-32A0A0A0MS00 114 aa13.05□□□□□ -0.32
COMMD4-205ENST00000562310 KLF4O43474 513 aa13.05□□□□□ -0.32
COMMD4-205ENST00000562310 CDC40O60508 579 aaKnown RBP eCLIP13.05□□□□□ -0.32
COMMD4-205ENST00000562310 MSX1P28360 303 aa13.05□□□□□ -0.32
COMMD4-205ENST00000562310 GGT2P36268 569 aa13.05□□□□□ -0.32
COMMD4-205ENST00000562310 SOX3P41225 446 aa13.05□□□□□ -0.32
COMMD4-205ENST00000562310 CRISP1P54107 249 aa13.05□□□□□ -0.32
COMMD4-205ENST00000562310 CTBP2P56545 445 aa13.05□□□□□ -0.32
COMMD4-205ENST00000562310 PRKCDQ05655 676 aa13.05□□□□□ -0.32
COMMD4-205ENST00000562310 DESI1Q6ICB0 168 aa13.05□□□□□ -0.32
COMMD4-205ENST00000562310 TTC33Q6PID6 262 aaPredicted RBP13.05□□□□□ -0.32
COMMD4-205ENST00000562310 CBLN3Q6UW01 205 aa13.05□□□□□ -0.32
COMMD4-205ENST00000562310 LINC00114Q6XXX2 140 aa13.05□□□□□ -0.32
COMMD4-205ENST00000562310 WDR88Q6ZMY6 472 aa13.05□□□□□ -0.32
COMMD4-205ENST00000562310 RASSF6Q6ZTQ3 369 aa13.05□□□□□ -0.32
COMMD4-205ENST00000562310 MARCH9Q86YJ5 346 aa13.05□□□□□ -0.32
COMMD4-205ENST00000562310 CLDN22Q8N7P3 220 aa13.05□□□□□ -0.32
COMMD4-205ENST00000562310 OR10G3Q8NGC4 313 aa13.05□□□□□ -0.32
COMMD4-205ENST00000562310 OR5M3Q8NGP4 307 aa13.05□□□□□ -0.32
COMMD4-205ENST00000562310 ZNF563Q8TA94 476 aa13.05□□□□□ -0.32
COMMD4-205ENST00000562310 C3orf49Q96BT1 292 aa13.05□□□□□ -0.32
COMMD4-205ENST00000562310 SH3YL1Q96HL8 342 aaPredicted RBP13.05□□□□□ -0.32
COMMD4-205ENST00000562310 FER1L6-AS2Q96M78 137 aa13.05□□□□□ -0.32
COMMD4-205ENST00000562310 CDCP1Q9H5V8 836 aa13.05□□□□□ -0.32
COMMD4-205ENST00000562310 SCOCQ9UIL1 159 aa13.05□□□□□ -0.32
COMMD4-205ENST00000562310 MYRFQ9Y2G1 1151 aa13.05□□□□□ -0.32
COMMD4-205ENST00000562310 PCSK5Q92824 1860 aa13.04□□□□□ -0.32
COMMD4-205ENST00000562310 AHCTF1Q8WYP5 2266 aa13.04□□□□□ -0.32
COMMD4-205ENST00000562310 A0A087WUJ7 227 aa13.04□□□□□ -0.32
COMMD4-205ENST00000562310 ANKUB1A6NFN9 424 aa13.04□□□□□ -0.32
COMMD4-205ENST00000562310 ELOA3DA6NLF2 546 aaPredicted RBP13.04□□□□□ -0.32
COMMD4-205ENST00000562310 ZAR1LA6NP61 321 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms