RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 GADD45GO95257 159 aa20.49■□□□□ 0.87
SYNGR3-202ENST00000562045 ZNF26P17031 533 aaPredicted RBP20.49■□□□□ 0.87
SYNGR3-202ENST00000562045 CDH12P55289 794 aa20.49■□□□□ 0.87
SYNGR3-202ENST00000562045 SMIM11AP58511 58 aa20.49■□□□□ 0.87
SYNGR3-202ENST00000562045 PPP1R8Q12972 351 aaKnown RBP20.49■□□□□ 0.87
SYNGR3-202ENST00000562045 SLC25A25Q6KCM7 469 aa20.49■□□□□ 0.87
SYNGR3-202ENST00000562045 PPP4R4Q6NUP7 873 aa20.49■□□□□ 0.87
SYNGR3-202ENST00000562045 IZUMO2Q6UXV1 221 aa20.49■□□□□ 0.87
SYNGR3-202ENST00000562045 CNOT9Q92600 299 aaKnown RBP20.49■□□□□ 0.87
SYNGR3-202ENST00000562045 TMCO6Q96DC7 493 aa20.49■□□□□ 0.87
SYNGR3-202ENST00000562045 TESQ9UGI8 421 aaKnown RBP20.49■□□□□ 0.87
SYNGR3-202ENST00000562045 A4GNTQ9UNA3 340 aa20.49■□□□□ 0.87
SYNGR3-202ENST00000562045 CHCHD2Q9Y6H1 151 aaPredicted RBP20.49■□□□□ 0.87
SYNGR3-202ENST00000562045 EIF4E1BA6NMX2 242 aaKnown RBP20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 ALG1L2C9J202 215 aa20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 NME2P1O60361 137 aa20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 FMO6PO60774 539 aa20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 RASAL1O95294 804 aa20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 ENDOUP21128 410 aaKnown RBP20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 NME2P22392 152 aa20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 ZNF136P52737 540 aa20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 GPR85P60893 370 aa20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 PLAURQ03405 335 aa20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 PIN1Q13526 163 aaPredicted RBP20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 NTRK2Q16620 822 aa20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 FNDC7Q5VTL7 733 aa20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 ZNF550Q7Z398 422 aa20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 NUP54Q7Z3B4 507 aa20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 TMEM179BQ7Z7N9 219 aa20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 STK32CQ86UX6 486 aa20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 CISD2Q8N5K1 135 aaKnown RBP20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 PSD4Q8NDX1 1056 aa20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 DHRS1Q96LJ7 313 aa20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 MCHR1Q99705 422 aa20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 TBL1XR1Q9BZK7 514 aa20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 POLR2J2Q9GZM3 115 aaKnown RBP20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 POLR2J3Q9H1A7 115 aaKnown RBP20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 NMNAT1Q9HAN9 279 aaPredicted RBP20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 ACER3Q9NUN7 267 aa20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 NINQ8N4C6 2090 aa20.48■□□□□ 0.87
SYNGR3-202ENST00000562045 PINLYPA6NC86 204 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 SOCS2O14508 198 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 TPST2O60704 377 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 BCAS1O75363 584 aaPredicted RBP20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 UBTFL6P0CB48 400 aaPredicted RBP20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 CD46P15529 392 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 EVI2BP34910 448 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 HMGA2P52926 109 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 TAS2R41P59536 307 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 BICRALQ6AI39 1079 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 RTL4Q6ZR62 310 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 GPALPP1Q8IXQ4 340 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 ZNF440Q8IYI8 595 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 POGLUT1Q8NBL1 392 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 PHOSPHO1Q8TCT1 267 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 SLC29A1Q99808 456 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 FNDC11Q9BVV2 318 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 RHCGQ9UBD6 479 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 CDK2AP1O14519 115 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 EI24O14681 340 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 WISP2O76076 250 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 H1F0P07305 194 aaKnown RBP20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 GKN3PP0CG01 181 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 UBL4AP11441 157 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 HOXC5Q00444 222 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 ENTPD8Q5MY95 495 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 OTUD3Q5T2D3 398 aaPredicted RBP20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 APOOLQ6UXV4 268 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 PLEKHM3Q6ZWE6 761 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 SULF2Q8IWU5 870 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 OFCC1Q8IZS5 231 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 GALNT4Q8N4A0 578 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 PIK3C3Q8NEB9 887 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 FAM71CQ8NEG0 241 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 OR52J3Q8NH60 311 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 HGDQ93099 445 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 SNRNP40Q96DI7 357 aaKnown RBP20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 C5orf34Q96MH7 638 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 ZNF184Q99676 751 aaPredicted RBP20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 OSBPL10Q9BXB5 764 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 PROK2Q9HC23 129 aa20.47■□□□□ 0.87
SYNGR3-202ENST00000562045 SHANK1Q9Y566 2161 aa20.46■□□□□ 0.87
SYNGR3-202ENST00000562045 ZNF462Q96JM2 2506 aa20.46■□□□□ 0.87
SYNGR3-202ENST00000562045 TTLL8A6PVC2 850 aa20.46■□□□□ 0.87
SYNGR3-202ENST00000562045 H0YJX3 145 aa20.46■□□□□ 0.87
SYNGR3-202ENST00000562045 FADS1O60427 444 aa20.46■□□□□ 0.87
SYNGR3-202ENST00000562045 CLK3P49761 638 aaKnown RBP20.46■□□□□ 0.87
SYNGR3-202ENST00000562045 CD226Q15762 336 aa20.46■□□□□ 0.87
SYNGR3-202ENST00000562045 PRAMEF20Q5VT98 475 aa20.46■□□□□ 0.87
SYNGR3-202ENST00000562045 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.46■□□□□ 0.87
SYNGR3-202ENST00000562045 DND1Q8IYX4 353 aaKnown RBP20.46■□□□□ 0.87
SYNGR3-202ENST00000562045 OR4C15Q8NGM1 316 aa20.46■□□□□ 0.87
SYNGR3-202ENST00000562045 ADAMTS16Q8TE57 1224 aa20.46■□□□□ 0.87
SYNGR3-202ENST00000562045 PAQR8Q8TEZ7 354 aa20.46■□□□□ 0.87
SYNGR3-202ENST00000562045 EXOSC3Q9NQT5 275 aaKnown RBP20.46■□□□□ 0.87
SYNGR3-202ENST00000562045 MAGED1Q9Y5V3 778 aaPredicted RBP20.46■□□□□ 0.87
SYNGR3-202ENST00000562045 RELNP78509 3460 aa20.46■□□□□ 0.87
SYNGR3-202ENST00000562045 NCKAP5O14513 1909 aa20.45■□□□□ 0.86
SYNGR3-202ENST00000562045 A0A1W2PRQ8 180 aa20.45■□□□□ 0.86
SYNGR3-202ENST00000562045 CPSF4LA6NMK7 179 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms