RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 ETV6P41212 452 aa9.04□□□□□ -0.96
SMG1-205ENST00000561947 ARL4DP49703 201 aa9.04□□□□□ -0.96
SMG1-205ENST00000561947 AFF3P51826 1226 aaKnown RBP9.04□□□□□ -0.96
SMG1-205ENST00000561947 PLK5Q496M5 336 aa9.04□□□□□ -0.96
SMG1-205ENST00000561947 KIRREL2Q6UWL6 708 aa9.04□□□□□ -0.96
SMG1-205ENST00000561947 LINC00114Q6XXX2 140 aa9.04□□□□□ -0.96
SMG1-205ENST00000561947 MED25Q71SY5 747 aa9.04□□□□□ -0.96
SMG1-205ENST00000561947 OTULINQ96BN8 352 aa9.04□□□□□ -0.96
SMG1-205ENST00000561947 MVB12AQ96EY5 273 aa9.04□□□□□ -0.96
SMG1-205ENST00000561947 PHOX2BQ99453 314 aa9.04□□□□□ -0.96
SMG1-205ENST00000561947 ZNF649Q9BS31 505 aa9.04□□□□□ -0.96
SMG1-205ENST00000561947 YIPF2Q9BWQ6 316 aa9.04□□□□□ -0.96
SMG1-205ENST00000561947 CMC2Q9NRP2 79 aa9.04□□□□□ -0.96
SMG1-205ENST00000561947 TXNL4BQ9NX01 149 aaKnown RBP9.04□□□□□ -0.96
SMG1-205ENST00000561947 CRNNQ9UBG3 495 aaPredicted RBP9.04□□□□□ -0.96
SMG1-205ENST00000561947 TNFRSF10DQ9UBN6 386 aa9.04□□□□□ -0.96
SMG1-205ENST00000561947 SF3B6Q9Y3B4 125 aaKnown RBP9.04□□□□□ -0.96
SMG1-205ENST00000561947 COL5A1P20908 1838 aaPredicted RBP9.03□□□□□ -0.96
SMG1-205ENST00000561947 EFCAB7A8K855 629 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 SOX1O00570 391 aaPredicted RBP9.03□□□□□ -0.96
SMG1-205ENST00000561947 UPK1BO75841 260 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 CSTAP01040 98 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 NGFRP08138 427 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 OR1D4P47884 311 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 CXCL12P48061 93 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 RPS25P62851 125 aaKnown RBP9.03□□□□□ -0.96
SMG1-205ENST00000561947 FOXK2Q01167 660 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 CFHR1Q03591 330 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 WDR45BQ5MNZ6 344 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 SLC35F1Q5T1Q4 408 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 ULK3Q6PHR2 472 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 MEPCEQ7L2J0 689 aaKnown RBP9.03□□□□□ -0.96
SMG1-205ENST00000561947 PLXDC1Q8IUK5 500 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 SLC35F3Q8IY50 421 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 CADM2Q8N3J6 435 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 KLHL36Q8N4N3 616 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 PARP16Q8N5Y8 322 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 SIRT6Q8N6T7 355 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 ZSCAN1Q8NBB4 408 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 OR1F2PQ96R84 312 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 KCNS3Q9BQ31 491 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 BARHL1Q9BZE3 327 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 DUSP15Q9H1R2 295 aaPredicted RBP9.03□□□□□ -0.96
SMG1-205ENST00000561947 SMURF1Q9HCE7 757 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 ERVK13-1Q9NX77 482 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 RPS6KB2Q9UBS0 482 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 BAIAP2Q9UQB8 552 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 PNMA8CA0A1B0GUJ8 204 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 SYNDIG1LA6NDD5 238 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 J3QRE1 110 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 ALAS2P22557 587 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 ATP6V1E1P36543 226 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 ZNF181Q2M3W8 571 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 NDUFAF6Q330K2 333 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 ARMC4Q5T2S8 1044 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 PRPF38BQ5VTL8 546 aaKnown RBP9.03□□□□□ -0.96
SMG1-205ENST00000561947 QSOX2Q6ZRP7 698 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 SLC43A2Q8N370 569 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 SLC25A45Q8N413 288 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 D2HGDHQ8N465 521 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 OR4C3Q8NH37 302 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 OR52N1Q8NH53 320 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 OR51A7Q8NH64 312 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 OR1L3Q8NH93 324 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 PTPMT1Q8WUK0 201 aaPredicted RBP9.03□□□□□ -0.96
SMG1-205ENST00000561947 SNRNP27Q8WVK2 155 aaKnown RBP9.03□□□□□ -0.96
SMG1-205ENST00000561947 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.03□□□□□ -0.96
SMG1-205ENST00000561947 TMEM203Q969S6 136 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 NACC2Q96BF6 587 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 SECISBP2Q96T21 854 aaKnown RBP9.03□□□□□ -0.96
SMG1-205ENST00000561947 MED20Q9H944 212 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 PNO1Q9NRX1 252 aaKnown RBP9.03□□□□□ -0.96
SMG1-205ENST00000561947 SNTG1Q9NSN8 517 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 TOR4AQ9NXH8 423 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 QPCTLQ9NXS2 382 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 YARS2Q9Y2Z4 477 aaKnown RBP9.03□□□□□ -0.96
SMG1-205ENST00000561947 MN1Q10571 1320 aaPredicted RBP9.03□□□□□ -0.96
SMG1-205ENST00000561947 ADAMTS20P59510 1910 aa9.03□□□□□ -0.96
SMG1-205ENST00000561947 A0A1B0GVT2 93 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 A0A1W2PPC1 479 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 FUOMA2VDF0 154 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 ISPDA4D126 451 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 SLC30A4O14863 429 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 PLD2O14939 933 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 LALBAP00709 142 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 GLB1P16278 677 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 PAICSP22234 425 aaKnown RBP9.02□□□□□ -0.97
SMG1-205ENST00000561947 TGM1P22735 817 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 GABRA5P31644 462 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 CSF2RBP32927 897 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 RORCP51449 518 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 SLC37A1P57057 533 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 CRYZQ08257 329 aaKnown RBP9.02□□□□□ -0.97
SMG1-205ENST00000561947 ACSM1Q08AH1 577 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 DMWDQ09019 674 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 ZNF791Q3KP31 576 aaPredicted RBP9.02□□□□□ -0.97
SMG1-205ENST00000561947 SNAP47Q5SQN1 464 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 C22orf42Q6IC83 251 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 ZNF554Q86TJ5 538 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 OAFQ86UD1 273 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms