RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 B3GNT7Q8NFL0 401 aa6.91□□□□□ -1.3
TPM1-231ENST00000561395 METTL21AQ8WXB1 218 aa6.91□□□□□ -1.3
TPM1-231ENST00000561395 SLC35B4Q969S0 331 aa6.91□□□□□ -1.3
TPM1-231ENST00000561395 SLC41A3Q96GZ6 507 aa6.91□□□□□ -1.3
TPM1-231ENST00000561395 MUS81Q96NY9 551 aa6.91□□□□□ -1.3
TPM1-231ENST00000561395 GAL3ST4Q96RP7 486 aa6.91□□□□□ -1.3
TPM1-231ENST00000561395 LMF1Q96S06 567 aa6.91□□□□□ -1.3
TPM1-231ENST00000561395 PITX2Q99697 317 aa6.91□□□□□ -1.3
TPM1-231ENST00000561395 MCHR1Q99705 422 aa6.91□□□□□ -1.3
TPM1-231ENST00000561395 NIPSNAP1Q9BPW8 284 aa6.91□□□□□ -1.3
TPM1-231ENST00000561395 WDR77Q9BQA1 342 aaPredicted RBP6.91□□□□□ -1.3
TPM1-231ENST00000561395 CRB3Q9BUF7 120 aa6.91□□□□□ -1.3
TPM1-231ENST00000561395 DGCR6LQ9BY27 220 aa6.91□□□□□ -1.3
TPM1-231ENST00000561395 B3GNT4Q9C0J1 378 aa6.91□□□□□ -1.3
TPM1-231ENST00000561395 AKIRIN1Q9H9L7 192 aaPredicted RBP6.91□□□□□ -1.3
TPM1-231ENST00000561395 ZNF556Q9HAH1 456 aa6.91□□□□□ -1.3
TPM1-231ENST00000561395 BATF3Q9NR55 127 aa6.91□□□□□ -1.3
TPM1-231ENST00000561395 CTPS2Q9NRF8 586 aa6.91□□□□□ -1.3
TPM1-231ENST00000561395 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.91□□□□□ -1.3
TPM1-231ENST00000561395 DNAJB12Q9NXW2 375 aaKnown RBP6.91□□□□□ -1.3
TPM1-231ENST00000561395 FOXJ2Q9P0K8 574 aa6.91□□□□□ -1.3
TPM1-231ENST00000561395 C19orf25Q9UFG5 118 aaPredicted RBP6.91□□□□□ -1.3
TPM1-231ENST00000561395 TESQ9UGI8 421 aaKnown RBP6.91□□□□□ -1.3
TPM1-231ENST00000561395 GPN3Q9UHW5 284 aaPredicted RBP6.91□□□□□ -1.3
TPM1-231ENST00000561395 NDRG4Q9ULP0 352 aaKnown RBP6.91□□□□□ -1.3
TPM1-231ENST00000561395 PPIEQ9UNP9 301 aaKnown RBP6.91□□□□□ -1.3
TPM1-231ENST00000561395 MGAT4BQ9UQ53 548 aa6.91□□□□□ -1.3
TPM1-231ENST00000561395 MYRFQ9Y2G1 1151 aa6.91□□□□□ -1.3
TPM1-231ENST00000561395 NTNG1Q9Y2I2 539 aa6.91□□□□□ -1.3
TPM1-231ENST00000561395 PDZD2O15018 2839 aa6.91□□□□□ -1.3
TPM1-231ENST00000561395 APCP25054 2843 aa6.91□□□□□ -1.3
TPM1-231ENST00000561395 ZFHX3Q15911 3703 aa6.91□□□□□ -1.3
TPM1-231ENST00000561395 IGHV3-20A0A0C4DH32 117 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 C2orf92A0A1B0GVN3 265 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 TRAPPC13A5PLN9 417 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 SERINC4A6NH21 518 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 C9J4A7 227 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 STMND1H3BQB6 276 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 PRKNO60260 465 aaPredicted RBP6.9□□□□□ -1.3
TPM1-231ENST00000561395 OR10H3O60404 316 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 CYP7B1O75881 506 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 UTS2O95399 124 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 GASTP01350 101 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 THY1P04216 161 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 KLK3P07288 261 aaPredicted RBP6.9□□□□□ -1.3
TPM1-231ENST00000561395 GKN3PP0CG01 181 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 PRG2P13727 222 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 COL8A1P27658 744 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 HTR2AP28223 471 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 EPHA2P29317 976 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 IFNA8P32881 189 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 RYKP34925 604 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 RPS6KA3P51812 740 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 UGT2B15P54855 530 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 TPD52P55327 224 aaPredicted RBP6.9□□□□□ -1.3
TPM1-231ENST00000561395 PSPHP78330 225 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 PLCXD2Q0VAA5 305 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 ST3GAL3Q11203 375 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 APOFQ13790 326 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 NCF4Q15080 339 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 KCTD21Q4G0X4 260 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 KLHL26Q53HC5 615 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 FNDC7Q5VTL7 733 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 HLA-DQA1Q5Y7H0 255 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 TTC33Q6PID6 262 aaPredicted RBP6.9□□□□□ -1.3
TPM1-231ENST00000561395 PAPD4Q6PIY7 484 aaKnown RBP6.9□□□□□ -1.3
TPM1-231ENST00000561395 KLHL17Q6TDP4 642 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 ISLR2Q6UXK2 745 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 GDF7Q7Z4P5 450 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 CPEB2Q7Z5Q1 589 aaKnown RBP6.9□□□□□ -1.3
TPM1-231ENST00000561395 CMIPQ8IY22 773 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 SLC34A3Q8N130 599 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 ZNF786Q8N393 782 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 IL22RA1Q8N6P7 574 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 ZNF614Q8N883 585 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 ZNF527Q8NB42 609 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 GALNT6Q8NCL4 622 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 APCDD1LQ8NCL9 501 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 SETD9Q8NE22 299 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 C17orf47Q8NEP4 570 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 TOR1AIP2Q8NFQ8 470 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 OR4K5Q8NGD3 323 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 ADAMTS16Q8TE57 1224 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 FBLIM1Q8WUP2 373 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 CNOT9Q92600 299 aaKnown RBP6.9□□□□□ -1.3
TPM1-231ENST00000561395 MR1Q95460 341 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 SLC38A4Q969I6 547 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 GTPBP3Q969Y2 492 aaKnown RBP6.9□□□□□ -1.3
TPM1-231ENST00000561395 EFHD2Q96C19 240 aaPredicted RBP6.9□□□□□ -1.3
TPM1-231ENST00000561395 HSPBAP1Q96EW2 488 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 ZNF559Q9BR84 538 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 MESP1Q9BRJ9 268 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 ZPBPQ9BS86 351 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 DDA1Q9BW61 102 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 YTHDF1Q9BYJ9 559 aaKnown RBP6.9□□□□□ -1.3
TPM1-231ENST00000561395 MRPS26Q9BYN8 205 aaKnown RBP6.9□□□□□ -1.3
TPM1-231ENST00000561395 UCK2Q9BZX2 261 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 HOXD1Q9GZZ0 328 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 ING2Q9H160 280 aa6.9□□□□□ -1.3
TPM1-231ENST00000561395 ENOPH1Q9UHY7 261 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms