RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 DHDDSQ86SQ9 333 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 PTOV1Q86YD1 416 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 LACC1Q8IV20 430 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 CLIP4Q8N3C7 705 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 NFKBIDQ8NI38 313 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 CA5BP1Q8WTZ4 195 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 ZBTB8AQ96BR9 441 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 CGREF1Q99674 301 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 TREX2Q9BQ50 279 aaPredicted RBP12.5□□□□□ -0.41
TPM1-230ENST00000561266 ELAC2Q9BQ52 826 aaKnown RBP12.5□□□□□ -0.41
TPM1-230ENST00000561266 SLC39A3Q9BRY0 314 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 A4GALTQ9NPC4 353 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.5□□□□□ -0.41
TPM1-230ENST00000561266 DNAJB12Q9NXW2 375 aaKnown RBP12.5□□□□□ -0.41
TPM1-230ENST00000561266 COQ3Q9NZJ6 369 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 P2RX2Q9UBL9 471 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.5□□□□□ -0.41
TPM1-230ENST00000561266 NDUFAF1Q9Y375 327 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 KLF2Q9Y5W3 355 aaPredicted RBP12.5□□□□□ -0.41
TPM1-230ENST00000561266 AP4B1Q9Y6B7 739 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 CENPEQ02224 2701 aa12.5□□□□□ -0.41
TPM1-230ENST00000561266 LOC100653049A0A140TA62 436 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 GCM2O75603 506 aaPredicted RBP12.49□□□□□ -0.41
TPM1-230ENST00000561266 KRT34O76011 436 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 AQP8O94778 261 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 ARAFP10398 606 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 KLK2P20151 261 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 LSP1P33241 339 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 RYKP34925 604 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 GCKP35557 465 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 MAGEA8P43361 318 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 ANXA11P50995 505 aaKnown RBP12.49□□□□□ -0.41
TPM1-230ENST00000561266 GZMMP51124 257 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 SUMO3P55854 103 aaPredicted RBP12.49□□□□□ -0.41
TPM1-230ENST00000561266 DLX5P56178 289 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 SESN3P58005 492 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 EEF1A1P68104 462 aaKnown RBP12.49□□□□□ -0.41
TPM1-230ENST00000561266 FADDQ13158 208 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 SNX32Q86XE0 403 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 TREML1Q86YW5 311 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 GCNT2Q8N0V5 402 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 METTL25Q8N6Q8 603 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 POU5F2Q8N7G0 328 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 ACBD4Q8NC06 268 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 ATP6V1C2Q8NEY4 427 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 OR52P1PQ8NH57 321 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 TSPEARQ8WU66 669 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 WDR60Q8WVS4 1066 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 ASB5Q8WWX0 329 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 ANKRD27Q96NW4 1050 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 PINK1Q9BXM7 581 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 USP22Q9UPT9 525 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 FREM1Q5H8C1 2179 aa12.49□□□□□ -0.41
TPM1-230ENST00000561266 UNC79Q9P2D8 2635 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 EIF1AYO14602 144 aaKnown RBP12.48□□□□□ -0.41
TPM1-230ENST00000561266 TNFSF11O14788 317 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 ADAMDEC1O15204 470 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 CXCL13O43927 109 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 PGM3O95394 542 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 GKN3PP0CG01 181 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 PRG2P13727 222 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 PRF1P14222 555 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 NID1P14543 1247 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 SFTPDP35247 375 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 ACAA2P42765 397 aaKnown RBP12.48□□□□□ -0.41
TPM1-230ENST00000561266 CRISP3P54108 245 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 RAC1P63000 192 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 HPCAP84074 193 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 SNTB1Q13884 538 aaKnown RBP12.48□□□□□ -0.41
TPM1-230ENST00000561266 CBFBQ13951 182 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 NFYCQ13952 458 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 GCNT6Q5T4J0 391 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 REP15Q6BDI9 236 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 LILRA2Q8N149 483 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 TOR1AIP2Q8NFQ8 470 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 OR10D3Q8NH80 312 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 FNDC9Q8TBE3 224 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 WNT2BQ93097 391 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 INTS12Q96CB8 462 aaKnown RBP12.48□□□□□ -0.41
TPM1-230ENST00000561266 DTNBP1Q96EV8 351 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 WFDC6Q9BQY6 131 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 CCDC106Q9BWC9 280 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 SRXN1Q9BYN0 137 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 FAM107BQ9H098 131 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 COQ10BQ9H8M1 238 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 BCL2L10Q9HD36 194 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 ACER3Q9NUN7 267 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 GMPR2Q9P2T1 348 aaKnown RBP12.48□□□□□ -0.41
TPM1-230ENST00000561266 ZNF443Q9Y2A4 671 aaPredicted RBP12.48□□□□□ -0.41
TPM1-230ENST00000561266 SLC35A3Q9Y2D2 325 aa12.48□□□□□ -0.41
TPM1-230ENST00000561266 GPC6Q9Y625 555 aaPredicted RBP12.48□□□□□ -0.41
TPM1-230ENST00000561266 DCHS2Q6V1P9 2916 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 A0A0G2JPF8 293 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 A0A1W2PNR3 127 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 CDHR4A6H8M9 788 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 HSPB2A8KAH6 182 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 HNRNPCL2B2RXH8 293 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 HNRNPCL3B7ZW38 293 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 LINC01387J3KSC0 135 aa12.47□□□□□ -0.41
TPM1-230ENST00000561266 ANGPT2O15123 496 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms