RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 GPS1Q13098 491 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 KCNJ11Q14654 390 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 KPNB1Q14974 876 aaKnown RBP3.22□□□□□ -1.89
HERC1-211ENST00000560983 SLC9A3R2Q15599 337 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 ACSBG2Q5FVE4 666 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 PPP1R2P3Q6NXS1 205 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 MZT2AQ6P582 158 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 ALKBH5Q6P6C2 394 aaKnown RBP3.22□□□□□ -1.89
HERC1-211ENST00000560983 TMEM81Q6P7N7 255 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 CYHR1Q6ZMK1 362 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 C17orf107Q6ZR85 190 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 FAM57BQ71RH2 274 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 CHMP1BQ7LBR1 199 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 ZNF571Q7Z3V5 609 aaPredicted RBP3.22□□□□□ -1.89
HERC1-211ENST00000560983 EXOC3L1Q86VI1 746 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 CCDC25Q86WR0 208 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 KLHDC8BQ8IXV7 354 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 UBQLNLQ8IYU4 475 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 FAM47BQ8NA70 645 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 OR13J1Q8NGT2 312 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 GSDMBQ8TAX9 411 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 DOK4Q8TEW6 326 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 PPWD1Q96BP3 646 aaKnown RBP3.22□□□□□ -1.89
HERC1-211ENST00000560983 MTBPQ96DY7 904 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 SFXN2Q96NB2 322 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 RUNDC3BQ96NL0 473 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 NODALQ96S42 347 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 CSF3RQ99062 836 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 VAT1Q99536 393 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 INPP5KQ9BT40 448 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 TSSK1BQ9BXA7 367 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 NPLQ9BXD5 320 aaPredicted RBP3.22□□□□□ -1.89
HERC1-211ENST00000560983 PINK1Q9BXM7 581 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 WWTR1Q9GZV5 400 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 RACGAP1Q9H0H5 632 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 ISCUQ9H1K1 167 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 GBA3Q9H227 469 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 SPNS1Q9H2V7 528 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 C10orf88Q9H8K7 445 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 LPAR2Q9HBW0 351 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 MYOZ1Q9NP98 299 aaPredicted RBP3.22□□□□□ -1.89
HERC1-211ENST00000560983 NECAP2Q9NVZ3 263 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 TMEM45AQ9NWC5 275 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 DNAJB11Q9UBS4 358 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 SLC2A6Q9UGQ3 507 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 OPN4Q9UHM6 478 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 HOOK1Q9UJC3 728 aaKnown RBP3.22□□□□□ -1.89
HERC1-211ENST00000560983 FBXL2Q9UKC9 423 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 ZNF337Q9Y3M9 751 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 GRIP1Q9Y3R0 1128 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 FKBP7Q9Y680 259 aa3.22□□□□□ -1.89
HERC1-211ENST00000560983 TRBV5-3A0A0A0MS03 114 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 A0A0G2JN53 185 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 A0A1B0GUS0 222 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 TRBC2A0A5B9 178 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 C5orf63A6NC05 138 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 RBMY1BA6NDE4 496 aaKnown RBP3.21□□□□□ -1.9
HERC1-211ENST00000560983 RBMY1EA6NEQ0 496 aaKnown RBP3.21□□□□□ -1.9
HERC1-211ENST00000560983 K7EIL1 84 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 PRMT5O14744 637 aaPredicted RBP3.21□□□□□ -1.9
HERC1-211ENST00000560983 LDB3O75112 727 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 INMTO95050 263 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 TBX6O95947 436 aaPredicted RBP3.21□□□□□ -1.9
HERC1-211ENST00000560983 PNPP00491 289 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 ADAP00813 363 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 OPN1MWP04001 364 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 ALDOAP04075 364 aaKnown RBP3.21□□□□□ -1.9
HERC1-211ENST00000560983 RHOXF2BP0C7M4 288 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 RBMY1DP0C7P1 496 aaKnown RBP3.21□□□□□ -1.9
HERC1-211ENST00000560983 OPN1MW2P0DN77 364 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 OPN1MW3P0DN78 364 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 DAOP14920 347 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 FERP16591 822 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 RBL1P28749 1068 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 ATP5DP30049 168 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 SRD5A2P31213 254 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 CDKN2AP42771 156 aaKnown RBP3.21□□□□□ -1.9
HERC1-211ENST00000560983 NR2C2P49116 596 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 KHKP50053 298 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 LIM2P55344 173 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 LMO4P61968 165 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 RGS1Q08116 209 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 STX4Q12846 297 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 BAMBIQ13145 260 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 POU6F1Q14863 301 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 EBPQ15125 230 aaKnown RBP3.21□□□□□ -1.9
HERC1-211ENST00000560983 PPA1Q15181 289 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 TMED2Q15363 201 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 KLHL38Q2WGJ6 581 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 FASTKD1Q53R41 847 aaKnown RBP3.21□□□□□ -1.9
HERC1-211ENST00000560983 TCP11X2Q5H9J9 407 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 CTSL3PQ5NE16 218 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 OLFML2AQ68BL7 652 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 PTRHD1Q6GMV3 140 aaKnown RBP3.21□□□□□ -1.9
HERC1-211ENST00000560983 PPP4R4Q6NUP7 873 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 SLC30A6Q6NXT4 461 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 SLC22A25Q6T423 547 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 TBC1D1Q86TI0 1168 aaPredicted RBP3.21□□□□□ -1.9
HERC1-211ENST00000560983 CARM1Q86X55 608 aa3.21□□□□□ -1.9
HERC1-211ENST00000560983 TAGAPQ8N103 731 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms