RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 CPPED1Q9BRF8 314 aaPredicted RBP13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 THUMPD3Q9BV44 507 aaKnown RBP13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 RAD21L1Q9H4I0 556 aa13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 BCL2L10Q9HD36 194 aa13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 A4GALTQ9NPC4 353 aa13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 CHST11Q9NPF2 352 aa13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 THUMPD1Q9NXG2 353 aaKnown RBP13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 NDUFAF1Q9Y375 327 aa13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 CHST2Q9Y4C5 530 aa13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 GPC6Q9Y625 555 aaPredicted RBP13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 HCFC1P51610 2035 aa13.74□□□□□ -0.21
SNRPA1-213ENST00000560856 NAV2Q8IVL1 2488 aa13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 A0A0J9YW62 118 aa13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 SEC14L5O43304 696 aa13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 NUDT14O95848 222 aa13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 IL2RAP01589 272 aa13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 OPN1LWP04000 364 aa13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 BCHEP06276 602 aa13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 SNRPB2P08579 225 aaKnown RBP13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 IGFBP2P18065 325 aa13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 HPCAP84074 193 aa13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 FOXF2Q12947 444 aa13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 KLF10Q13118 480 aa13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 CBFBQ13951 182 aa13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 ADRM1Q16186 407 aa13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 SLC25A35Q3KQZ1 300 aa13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 RPS26P11Q5JNZ5 115 aaPredicted RBP13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 CMIPQ8IY22 773 aa13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 SMPDL3BQ92485 455 aa13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 FIG4Q92562 907 aa13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 MAL2Q969L2 176 aa13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 MRGPRX4Q96LA9 322 aa13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 ENKD1Q9H0I2 346 aa13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 KCNJ16Q9NPI9 418 aa13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 EXOSC3Q9NQT5 275 aaKnown RBP13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 DNAJB12Q9NXW2 375 aaKnown RBP13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 CALML5Q9NZT1 146 aa13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 ZNF629Q9UEG4 869 aaPredicted RBP13.73□□□□□ -0.21
SNRPA1-213ENST00000560856 A0A0G2JPF8 293 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 HNRNPCL2B2RXH8 293 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 HNRNPCL3B7ZW38 293 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 DYNC1I1O14576 645 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 HNRNPCL1O60812 293 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 CYP7B1O75881 506 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 IL18BPO95998 194 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 DBIP07108 87 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 HNRNPCL4P0DMR1 293 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 ARAFP10398 606 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 NID1P14543 1247 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 PPIBP23284 216 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 CTSSP25774 331 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 ELK4P28324 431 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 CCR4P51679 360 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 CRISP3P54108 245 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 EEFSECP57772 596 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 SESN3P58005 492 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 SELPLGQ14242 412 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 PRAMEF8Q5VWM4 474 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 PRAMEF7Q5VXH5 474 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 DHDDSQ86SQ9 333 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 VRK2Q86Y07 508 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 TMCO5AQ8N6Q1 288 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 WDR60Q8WVS4 1066 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 ST8SIA1Q92185 356 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 ZFP3Q96NJ6 502 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 ANKRD27Q96NW4 1050 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 CGREF1Q99674 301 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 TM9SF2Q99805 663 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 TMEM185BQ9H7F4 350 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 ACER3Q9NUN7 267 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 ZNF175Q9Y473 711 aa13.72□□□□□ -0.21
SNRPA1-213ENST00000560856 SLC22A20A6NK97 555 aa13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 EIF1AYO14602 144 aaKnown RBP13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 ANGPT2O15123 496 aa13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 PGM3O95394 542 aa13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 TMIGD3P0DMS9 266 aaPredicted RBP13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 PGCP20142 388 aa13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 ADSLP30566 484 aaPredicted RBP13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 SEC24CP53992 1094 aa13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 EEF1A1P68104 462 aaKnown RBP13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 GCNT6Q5T4J0 391 aa13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 MRPL2Q5T653 305 aaKnown RBP13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 ZNF836Q6ZNA1 936 aa13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 ESPNLQ6ZVH7 1005 aa13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 GRAMD2AQ8IUY3 354 aa13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 PEX5LQ8IYB4 626 aa13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 LILRA2Q8N149 483 aa13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 OR52P1PQ8NH57 321 aa13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 OR10D3Q8NH80 312 aa13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 OR2V1Q8NHB1 315 aa13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 FNDC9Q8TBE3 224 aa13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 INTS12Q96CB8 462 aaKnown RBP13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 PINK1Q9BXM7 581 aa13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 TRIM8Q9BZR9 551 aa13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 TMEM38AQ9H6F2 299 aa13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 RLIMQ9NVW2 624 aa13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 JKAMPQ9P055 326 aa13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 STOML1Q9UBI4 398 aa13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.71□□□□□ -0.21
SNRPA1-213ENST00000560856 CDHR4A6H8M9 788 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms