RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 PHOSPHO1Q8TCT1 267 aa15.7■□□□□ 0.1
TSPAN3-208ENST00000560514 ARL8AQ96BM9 186 aa15.7■□□□□ 0.1
TSPAN3-208ENST00000560514 ZNF775Q96BV0 537 aaPredicted RBP15.7■□□□□ 0.1
TSPAN3-208ENST00000560514 ZNF382Q96SR6 550 aa15.7■□□□□ 0.1
TSPAN3-208ENST00000560514 FKRPQ9H9S5 495 aa15.7■□□□□ 0.1
TSPAN3-208ENST00000560514 STK38LQ9Y2H1 464 aa15.7■□□□□ 0.1
TSPAN3-208ENST00000560514 GPC6Q9Y625 555 aaPredicted RBP15.7■□□□□ 0.1
TSPAN3-208ENST00000560514 A0A1W2PQD3 144 aa15.69■□□□□ 0.1
TSPAN3-208ENST00000560514 IFI6P09912 130 aa15.69■□□□□ 0.1
TSPAN3-208ENST00000560514 ITGA2P17301 1181 aa15.69■□□□□ 0.1
TSPAN3-208ENST00000560514 SERPINB4P48594 390 aa15.69■□□□□ 0.1
TSPAN3-208ENST00000560514 HTR6P50406 440 aa15.69■□□□□ 0.1
TSPAN3-208ENST00000560514 IMPG1Q17R60 797 aa15.69■□□□□ 0.1
TSPAN3-208ENST00000560514 FAM71E1Q6IPT2 247 aa15.69■□□□□ 0.1
TSPAN3-208ENST00000560514 B3GLCTQ6Y288 498 aa15.69■□□□□ 0.1
TSPAN3-208ENST00000560514 GALNT5Q7Z7M9 940 aa15.69■□□□□ 0.1
TSPAN3-208ENST00000560514 IFT20Q8IY31 132 aa15.69■□□□□ 0.1
TSPAN3-208ENST00000560514 ZNF433Q8N7K0 673 aaPredicted RBP15.69■□□□□ 0.1
TSPAN3-208ENST00000560514 FBXO30Q8TB52 745 aa15.69■□□□□ 0.1
TSPAN3-208ENST00000560514 ZNF300Q96RE9 604 aaPredicted RBP15.69■□□□□ 0.1
TSPAN3-208ENST00000560514 PRR14Q9BWN1 585 aa15.69■□□□□ 0.1
TSPAN3-208ENST00000560514 ADAM19Q9H013 955 aa15.69■□□□□ 0.1
TSPAN3-208ENST00000560514 COQ10BQ9H8M1 238 aa15.69■□□□□ 0.1
TSPAN3-208ENST00000560514 WBP11Q9Y2W2 641 aaKnown RBP15.69■□□□□ 0.1
TSPAN3-208ENST00000560514 EXOC1LA0A1B0GW35 172 aa15.68■□□□□ 0.1
TSPAN3-208ENST00000560514 KCNK2O95069 426 aa15.68■□□□□ 0.1
TSPAN3-208ENST00000560514 HSPA4LO95757 839 aa15.68■□□□□ 0.1
TSPAN3-208ENST00000560514 ENO1P06733 434 aaKnown RBP15.68■□□□□ 0.1
TSPAN3-208ENST00000560514 IMPDH1P20839 514 aa15.68■□□□□ 0.1
TSPAN3-208ENST00000560514 APOBEC3AP31941 199 aaPredicted RBP15.68■□□□□ 0.1
TSPAN3-208ENST00000560514 SELENBP1Q13228 472 aa15.68■□□□□ 0.1
TSPAN3-208ENST00000560514 ZNF551Q7Z340 670 aaPredicted RBP15.68■□□□□ 0.1
TSPAN3-208ENST00000560514 MTERF4Q7Z6M4 381 aaKnown RBP15.68■□□□□ 0.1
TSPAN3-208ENST00000560514 SLC22A9Q8IVM8 553 aa15.68■□□□□ 0.1
TSPAN3-208ENST00000560514 COX18Q8N8Q8 333 aa15.68■□□□□ 0.1
TSPAN3-208ENST00000560514 ZNF527Q8NB42 609 aa15.68■□□□□ 0.1
TSPAN3-208ENST00000560514 ZNF540Q8NDQ6 660 aa15.68■□□□□ 0.1
TSPAN3-208ENST00000560514 NUP43Q8NFH3 380 aa15.68■□□□□ 0.1
TSPAN3-208ENST00000560514 ZFP28Q8NHY6 868 aa15.68■□□□□ 0.1
TSPAN3-208ENST00000560514 ACMSDQ8TDX5 336 aa15.68■□□□□ 0.1
TSPAN3-208ENST00000560514 C1orf159Q96HA4 380 aa15.68■□□□□ 0.1
TSPAN3-208ENST00000560514 SIRT5Q9NXA8 310 aa15.68■□□□□ 0.1
TSPAN3-208ENST00000560514 NTMQ9P121 344 aa15.68■□□□□ 0.1
TSPAN3-208ENST00000560514 A0A1W2PNR3 127 aa15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 LOC390937A0A1W2PQ73 354 aa15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 A0A1W2PR80 420 aa15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 ZNF724A8MTY0 619 aa15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 VWC2LB2RUY7 222 aa15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 H3BNH8 94 aa15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 EFNA2O43921 213 aa15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 CYTIPO60759 359 aa15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 ALOX5P09917 674 aa15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 P2RX1P51575 399 aa15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 SUMO3P55854 103 aaPredicted RBP15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 ZNF117Q03924 483 aa15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 CD226Q15762 336 aa15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 ZNF678Q5SXM1 525 aa15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 FBXW9Q5XUX1 488 aa15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 IKBIPQ70UQ0 350 aa15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 ZAR1Q86SH2 424 aa15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 KIF18AQ8NI77 898 aa15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 JADE3Q92613 823 aa15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 ZMYND19Q96E35 227 aaPredicted RBP15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 CHMP6Q96FZ7 201 aa15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 MS4A4EQ96PG1 132 aa15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 KLHDC3Q9BQ90 382 aa15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 MYOZ1Q9NP98 299 aaPredicted RBP15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 EMC3Q9P0I2 261 aa15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 POLR3HQ9Y535 204 aaPredicted RBP15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 TIMM22Q9Y584 194 aa15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 SLC25A15Q9Y619 301 aa15.67■□□□□ 0.1
TSPAN3-208ENST00000560514 SERTM1A2A2V5 107 aa15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 GTPBP1O00178 669 aaKnown RBP15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 PDPK1O15530 556 aa15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 IGHV3-9P01782 118 aa15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 GSTA1P08263 222 aa15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 ACP2P11117 423 aa15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 ATP6V1C1P21283 382 aa15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 ATP5F1P24539 256 aaPredicted RBP15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 MAP3K8P41279 467 aa15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 PRKAA2P54646 552 aa15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 NAA20P61599 178 aa15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 UNC50Q53HI1 259 aa15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 SLC16A11Q8NCK7 471 aa15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 HOXB13Q92826 284 aaPredicted RBP15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 APH1AQ96BI3 265 aa15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 FBXO17Q96EF6 278 aa15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 MRGPRX4Q96LA9 322 aa15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 FOXN4Q96NZ1 517 aa15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 OR5B2Q96R09 309 aa15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 C1QTNF6Q9BXI9 259 aa15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 TMEM216Q9P0N5 145 aa15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 DCDC2Q9UHG0 476 aa15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 ING1Q9UK53 422 aaPredicted RBP15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 CARD8Q9Y2G2 431 aa15.66■□□□□ 0.1
TSPAN3-208ENST00000560514 ARFGEF3Q5TH69 2177 aa15.65■□□□□ 0.1
TSPAN3-208ENST00000560514 IGHV4-61A0A0C4DH41 118 aa15.65■□□□□ 0.1
TSPAN3-208ENST00000560514 RIPK2O43353 540 aa15.65■□□□□ 0.1
TSPAN3-208ENST00000560514 ZNF23P17027 643 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms