RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 OPN1SWP03999 348 aa14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 GKN3PP0CG01 181 aa14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 RNF224P0DH78 156 aa14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 PRKCAP17252 672 aa14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 POU3F2P20265 443 aaPredicted RBP14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 PSMA4P25789 261 aaKnown RBP14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 ACVR2AP27037 513 aa14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 CLDN18P56856 261 aa14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 PCBP3P57721 371 aaKnown RBP14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 VMACQ2NL98 169 aa14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 RNF220Q5VTB9 566 aa14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 RTL6Q6ICC9 239 aa14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 ARPINQ7Z6K5 226 aa14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 COMTD1Q86VU5 262 aa14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 KRT73Q86Y46 540 aa14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 ULK2Q8IYT8 1036 aa14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 UBQLNLQ8IYU4 475 aa14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 REXO5Q96IC2 774 aaKnown RBP14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 HOPXQ9BPY8 73 aaPredicted RBP14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 SPATA9Q9BWV2 254 aa14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 TMEM185BQ9H7F4 350 aa14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 ZNF232Q9UNY5 417 aa14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 MEMO1Q9Y316 297 aa14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 FAM215AQ9Y5M1 114 aa14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 PHF3Q92576 2039 aaKnown RBP14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 FLNCQ14315 2725 aa14.01□□□□□ -0.17
LYSMD2-204ENST00000560491 MYO7BQ6PIF6 2116 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 C7orf72A4D263 438 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 CLEC18AA5D8T8 446 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 FAM220BPB1ANY3 271 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 H0Y3Z8 333 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 H0YC42 278 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 SEC14L5O43304 696 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 FRS3O43559 492 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 TPST1O60507 370 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 AGFG2O95081 481 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 EPPINO95925 133 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 OPN1LWP04000 364 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 ESRRAP11474 423 aaPredicted RBP14□□□□□ -0.17
LYSMD2-204ENST00000560491 ZNF708P17019 499 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 PGCP20142 388 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 TPD52P55327 224 aaPredicted RBP14□□□□□ -0.17
LYSMD2-204ENST00000560491 CLDN20P56880 219 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 SESN3P58005 492 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 PSME3P61289 254 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 DMTNQ08495 405 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 KRT72Q14CN4 511 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 GLIPR1L2Q4G1C9 344 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 C1orf185Q5T7R7 199 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 ENPP6Q6UWR7 440 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 CLEC18BQ6UXF7 455 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 MARVELD2Q8N4S9 558 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 FAM26EQ8N5C1 309 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 SMYD1Q8NB12 490 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 CLEC18CQ8NCF0 446 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 ZNF563Q8TA94 476 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 CCDC120Q96HB5 630 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 DMRTA2Q96SC8 542 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 ZNF607Q96SK3 696 aa14□□□□□ -0.17
LYSMD2-204ENST00000560491 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 CFAP73A6NFT4 308 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 E9PLN8 166 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 EFNA2O43921 213 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 WDR1O75083 606 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 MFN2O95140 757 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 NTN1O95631 604 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 PEPDP12955 493 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 PRG2P13727 222 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 CPN1P15169 458 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 SHC1P29353 583 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 PRKAR1BP31321 381 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 IDH2P48735 452 aaKnown RBP13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 SUCLG1P53597 346 aaKnown RBP13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 CLDN15P56746 228 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 ADORA2A-AS1P86434 159 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 LIPEQ05469 1076 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 EPS8Q12929 822 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 ACSF3Q4G176 576 aaPredicted RBP13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 PLXDC2Q6UX71 529 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 RPTNQ6XPR3 784 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 ARMC8Q8IUR7 673 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 GRAMD2AQ8IUY3 354 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 SLC30A8Q8IWU4 369 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 PM20D2Q8IYS1 436 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 OR2T12Q8NG77 320 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 TAMM41Q96BW9 452 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 MRGPRX4Q96LA9 322 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 VKORC1Q9BQB6 163 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 TUBA1CQ9BQE3 449 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 SPATA5L1Q9BVQ7 753 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 ABCD2Q9UBJ2 740 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 PACSIN3Q9UKS6 424 aa13.99□□□□□ -0.17
LYSMD2-204ENST00000560491 LINC01387J3KSC0 135 aa13.98□□□□□ -0.17
LYSMD2-204ENST00000560491 M0QX08 132 aa13.98□□□□□ -0.17
LYSMD2-204ENST00000560491 ETV2O00321 342 aaPredicted RBP13.98□□□□□ -0.17
LYSMD2-204ENST00000560491 SERPINB7O75635 380 aa13.98□□□□□ -0.17
LYSMD2-204ENST00000560491 LDLRP01130 860 aa13.98□□□□□ -0.17
LYSMD2-204ENST00000560491 GABRA1P14867 456 aa13.98□□□□□ -0.17
LYSMD2-204ENST00000560491 EIF1P41567 113 aaKnown RBP13.98□□□□□ -0.17
LYSMD2-204ENST00000560491 ACAA2P42765 397 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms