RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 EFHD2Q96C19 240 aaPredicted RBP12.25□□□□□ -0.45
SMAD3-214ENST00000560402 SLC39A3Q9BRY0 314 aa12.25□□□□□ -0.45
SMAD3-214ENST00000560402 EBPLQ9BY08 206 aa12.25□□□□□ -0.45
SMAD3-214ENST00000560402 HHATLQ9HCP6 504 aa12.25□□□□□ -0.45
SMAD3-214ENST00000560402 MYNNQ9NPC7 610 aa12.25□□□□□ -0.45
SMAD3-214ENST00000560402 RPH3AQ9Y2J0 694 aaPredicted RBP12.25□□□□□ -0.45
SMAD3-214ENST00000560402 SLC22A20A6NK97 555 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 EVPLLA8MZ36 301 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 MYO1GB0I1T2 1018 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 SCO2O43819 266 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 ZIC3O60481 467 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 UMPSP11172 480 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 HOXB4P17483 251 aaPredicted RBP12.24□□□□□ -0.45
SMAD3-214ENST00000560402 CD53P19397 219 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 PPIBP23284 216 aaKnown RBP12.24□□□□□ -0.45
SMAD3-214ENST00000560402 SLC7A1P30825 629 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 HOXC12P31275 282 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 STARP49675 285 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 GSK3BP49841 420 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 NCBP2P52298 156 aaKnown RBP eCLIP12.24□□□□□ -0.45
SMAD3-214ENST00000560402 B3GALT5-AS1P59052 145 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 TRIP10Q15642 601 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 DECR1Q16698 335 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 RAET1LQ5VY80 246 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 NANOGP8Q6NSW7 305 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 IKBIPQ70UQ0 350 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 CLHC1Q8NHS4 586 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 CDC26Q8NHZ8 85 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 DUS3LQ96G46 650 aaKnown RBP12.24□□□□□ -0.45
SMAD3-214ENST00000560402 ZNF184Q99676 751 aaPredicted RBP12.24□□□□□ -0.45
SMAD3-214ENST00000560402 PIP5K1AQ99755 562 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 THUMPD3Q9BV44 507 aaKnown RBP12.24□□□□□ -0.45
SMAD3-214ENST00000560402 KLHL4Q9C0H6 718 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 Q9H521 79 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 PTGES2Q9H7Z7 377 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 YY1AP1Q9H869 796 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 ANKRA2Q9H9E1 313 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 NANOGQ9H9S0 305 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 C3orf14Q9HBI5 128 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 Q9N2J8 555 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 DDX18Q9NVP1 670 aaKnown RBP12.24□□□□□ -0.45
SMAD3-214ENST00000560402 CMTM6Q9NX76 183 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 ZNF226Q9NYT6 803 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 TAS2R7Q9NYW3 318 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 C19orf53Q9UNZ5 99 aaPredicted RBP12.24□□□□□ -0.45
SMAD3-214ENST00000560402 CORO2BQ9UQ03 480 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 ZNF175Q9Y473 711 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 AP4S1Q9Y587 144 aa12.24□□□□□ -0.45
SMAD3-214ENST00000560402 TCRBV3S1A0A5B6 114 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 RFXANKO14593 260 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 CASQ2O14958 399 aaPredicted RBP12.23□□□□□ -0.45
SMAD3-214ENST00000560402 FADS1O60427 444 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 TNFRSF21O75509 655 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 SMNDC1O75940 238 aaKnown RBP eCLIP12.23□□□□□ -0.45
SMAD3-214ENST00000560402 TGM6O95932 706 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 FCGR2AP12318 317 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 HK1P19367 917 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 ATP6V1C1P21283 382 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 MC3RP41968 323 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 CLK3P49761 638 aaKnown RBP12.23□□□□□ -0.45
SMAD3-214ENST00000560402 ERFP50548 548 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 RPS3AP61247 264 aaKnown RBP12.23□□□□□ -0.45
SMAD3-214ENST00000560402 MS4A2Q01362 244 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 C2orf80Q0P641 193 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 POU4F3Q15319 338 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 GLYR1Q49A26 553 aaPredicted RBP12.23□□□□□ -0.45
SMAD3-214ENST00000560402 SWT1Q5T5J6 900 aaKnown RBP12.23□□□□□ -0.45
SMAD3-214ENST00000560402 CPTPQ5TA50 214 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 OR5M10Q6IEU7 315 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 FAM71E1Q6IPT2 247 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 LRRC75A-AS1Q8N1F1 130 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 OR2L13Q8N349 312 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 NATD1Q8N6N6 113 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 FAM156AQ8NDB6 213 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 OR2M3Q8NG83 312 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 GTF2H4Q92759 462 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 GFM2Q969S9 779 aaKnown RBP12.23□□□□□ -0.45
SMAD3-214ENST00000560402 MTERF3Q96E29 417 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 ZNF764Q96H86 408 aaPredicted RBP12.23□□□□□ -0.45
SMAD3-214ENST00000560402 C18orf12Q96KH6 178 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 PIGQQ9BRB3 760 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 PCDHAC1Q9H158 963 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 ELOVL5Q9NYP7 299 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 PCDHGB4Q9UN71 923 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 LRRC42Q9Y546 428 aa12.23□□□□□ -0.45
SMAD3-214ENST00000560402 NSD1Q96L73 2696 aaPredicted RBP12.23□□□□□ -0.45
SMAD3-214ENST00000560402 ABCA2Q9BZC7 2435 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 RAI1Q7Z5J4 1906 aaPredicted RBP12.22□□□□□ -0.45
SMAD3-214ENST00000560402 DHRS12A0PJE2 317 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 FAM171A2A8MVW0 826 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 B4DXG7 233 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 SCAMP2O15127 329 aaKnown RBP12.22□□□□□ -0.45
SMAD3-214ENST00000560402 ARPC2O15144 300 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 ARHGEF9O43307 516 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 IL33O95760 270 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 CD8BP10966 210 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 MSX2P35548 267 aaPredicted RBP12.22□□□□□ -0.45
SMAD3-214ENST00000560402 CD79BP40259 229 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 HSPA13P48723 471 aa12.22□□□□□ -0.45
SMAD3-214ENST00000560402 GRAMD1BQ3KR37 738 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms