RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 ZNF446Q9NWS9 450 aa10.45□□□□□ -0.74
RABGGTA-216ENST00000560243 PACSIN3Q9UKS6 424 aa10.45□□□□□ -0.74
RABGGTA-216ENST00000560243 CLEC4AQ9UMR7 237 aa10.45□□□□□ -0.74
RABGGTA-216ENST00000560243 FAM234BA2RU67 622 aa10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 A8MXE2 369 aa10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 EIF4E2O60573 245 aaKnown RBP10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 DNAJA2O60884 412 aa10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 ADAM11O75078 769 aa10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 TGDSO95455 350 aa10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 ME2P23368 584 aa10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 PGM1P36871 562 aa10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 EIF1P41567 113 aaKnown RBP10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 CPA2P48052 419 aa10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 FGFBP1Q14512 234 aa10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 QPRTQ15274 297 aa10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 GUSBP1Q15486 140 aa10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 AP1ARQ63HQ0 302 aa10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 HBMQ6B0K9 141 aa10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 OR2A2Q6IF42 318 aa10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 SLC2A7Q6PXP3 512 aa10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 ZNF474Q6S9Z5 364 aaPredicted RBP10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 TMEM200AQ86VY9 491 aa10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 FUNDC1Q8IVP5 155 aa10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 ZNF619Q8N2I2 560 aa10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 TRIML2Q8N7C3 387 aa10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 CKAP2Q8WWK9 683 aa10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 KLHL15Q96M94 604 aa10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 SRXN1Q9BYN0 137 aa10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 LAT2Q9GZY6 243 aa10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 PIGMQ9H3S5 423 aa10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 GPC6Q9Y625 555 aaPredicted RBP10.44□□□□□ -0.74
RABGGTA-216ENST00000560243 HIVEP1P15822 2718 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 TUBAL3A6NHL2 446 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 MSTNO14793 375 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 POLR3GO15318 223 aaPredicted RBP10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 CTAG2O75638 210 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 CGAP01215 116 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 CRHP06850 196 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 GUSBP08236 651 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 ETFAP13804 333 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 NID1P14543 1247 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 CPOXP36551 454 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 CARD18P57730 90 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 SESN3P58005 492 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 FAM27E3Q08E93 113 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 LRRC74AQ0VAA2 488 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 TMEM176BQ3YBM2 270 aaPredicted RBP10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 SLC25A53Q5H9E4 307 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 C6orf10Q5SRN2 563 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 ESPNLQ6ZVH7 1005 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 EIF3MQ7L2H7 374 aaKnown RBP10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 KIF18BQ86Y91 864 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 ZNF610Q8N9Z0 462 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 FAM71CQ8NEG0 241 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 TOR1AIP2Q8NFQ8 470 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 FAM222BQ8WU58 562 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 ROBO4Q8WZ75 1007 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 CNOT9Q92600 299 aaKnown RBP10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 GTF2H4Q92759 462 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 OSTF1Q92882 214 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 LRRC46Q96FV0 321 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 ITCHQ96J02 903 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 MRGPRX4Q96LA9 322 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 MAGEB18Q96M61 343 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 TRNT1Q96Q11 434 aaKnown RBP10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 GPATCH1Q9BRR8 931 aaKnown RBP10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 CCDC28BQ9BUN5 200 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 PRRG4Q9BZD6 226 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 PAIP1Q9H074 479 aaKnown RBP10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 COQ10BQ9H8M1 238 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 POLE3Q9NRF9 147 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 STOML1Q9UBI4 398 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 FOXD3Q9UJU5 478 aaPredicted RBP10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 FREM1Q5H8C1 2179 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 PRR14LQ5THK1 2151 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 F8P00451 2351 aa10.43□□□□□ -0.74
RABGGTA-216ENST00000560243 A0A1W2PNR3 127 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 AGAP5A6NIR3 686 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 ETV2O00321 342 aaPredicted RBP10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 AP3D1O14617 1153 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 ANP32DO95626 131 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 KRT75O95678 551 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 ZCCHC18P0CG32 403 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 NR2F1P10589 423 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 FCGR2AP12318 317 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 HOXB9P17482 250 aaPredicted RBP10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 KLK2P20151 261 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 ELK4P28324 431 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 ADH6P28332 368 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 RYKP34925 604 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 CRATP43155 626 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 MRPL19P49406 292 aaKnown RBP10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 STX1BP61266 288 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 KCNJ10P78508 379 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 HPCAP84074 193 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 SORDQ00796 357 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 CBFBQ13951 182 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 BLOC1S3Q6QNY0 202 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 LRRC74BQ6ZQY2 392 aa10.42□□□□□ -0.74
RABGGTA-216ENST00000560243 MSANTD1Q6ZTZ1 278 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms