RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 THRBP10828 461 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 CDH2P19022 906 aaPredicted RBP10.27□□□□□ -0.77
USP3-218ENST00000560202 RYKP34925 604 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 DAPP51397 102 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 SSR4P51571 173 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 EPS8Q12929 822 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 TRAM2Q15035 370 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 SEC23BQ15437 767 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 JMJD6Q6NYC1 403 aaPredicted RBP10.27□□□□□ -0.77
USP3-218ENST00000560202 FAHD1Q6P587 224 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 PODNL1Q6PEZ8 512 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 CBLN3Q6UW01 205 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 GDF7Q7Z4P5 450 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 SIRT6Q8N6T7 355 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 LSMEM1Q8N8F7 131 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 ATG16L2Q8NAA4 619 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 OR10G3Q8NGC4 313 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 BRIX1Q8TDN6 353 aaKnown RBP10.27□□□□□ -0.77
USP3-218ENST00000560202 RNF138Q8WVD3 245 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 ASB15Q8WXK1 588 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 PSMF1Q92530 271 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 THOC3Q96J01 351 aaKnown RBP10.27□□□□□ -0.77
USP3-218ENST00000560202 FER1L6-AS2Q96M78 137 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 SLX1AQ9BQ83 275 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 PSD2Q9BQI7 771 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 LAT2Q9GZY6 243 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 ANKRD19PQ9H560 264 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 ATP13A2Q9NQ11 1180 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 SMPD3Q9NY59 655 aaPredicted RBP10.27□□□□□ -0.77
USP3-218ENST00000560202 KIF17Q9P2E2 1029 aa10.27□□□□□ -0.77
USP3-218ENST00000560202 TMEFF2Q9UIK5 374 aaPredicted RBP10.27□□□□□ -0.77
USP3-218ENST00000560202 AHCTF1Q8WYP5 2266 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 ARRDC5A6NEK1 342 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 ADAM10O14672 748 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 TP53I11O14683 189 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 HCRTR2O43614 444 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 EIF4E2O60573 245 aaKnown RBP10.26□□□□□ -0.77
USP3-218ENST00000560202 ANXA8P13928 327 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 SPINK2P20155 84 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 IGFBP5P24593 272 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 TTKP33981 857 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 ST13P50502 369 aaKnown RBP10.26□□□□□ -0.77
USP3-218ENST00000560202 ZNF117Q03924 483 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 AIMP2Q13155 320 aaKnown RBP10.26□□□□□ -0.77
USP3-218ENST00000560202 SRSF6Q13247 344 aaKnown RBP10.26□□□□□ -0.77
USP3-218ENST00000560202 CLN3Q13286 438 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 NHSL2Q5HYW2 709 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 B3GNTL1Q67FW5 361 aaPredicted RBP10.26□□□□□ -0.77
USP3-218ENST00000560202 KDM4DQ6B0I6 523 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 ZNF613Q6PF04 617 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 IL20RBQ6UXL0 311 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 MISPQ8IVT2 679 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 DND1Q8IYX4 353 aaKnown RBP10.26□□□□□ -0.77
USP3-218ENST00000560202 PIP4P2Q8N4L2 257 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 TMEM156Q8N614 296 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 TMCO5AQ8N6Q1 288 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 TOR1AIP2Q8NFQ8 470 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 OR9Q2Q8NGE9 314 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 SLC38A4Q969I6 547 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 ABTB1Q969K4 478 aaPredicted RBP10.26□□□□□ -0.77
USP3-218ENST00000560202 SH3YL1Q96HL8 342 aaPredicted RBP10.26□□□□□ -0.77
USP3-218ENST00000560202 RDH12Q96NR8 316 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 FEVQ99581 238 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 OSBPL11Q9BXB4 747 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 TBC1D23Q9NUY8 699 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 SLC7A7Q9UM01 511 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 CEPT1Q9Y6K0 416 aa10.26□□□□□ -0.77
USP3-218ENST00000560202 A0A087WUU8 490 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 A0A0B4J2E0 115 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 A0A1B0GWA3 101 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 A0A1B0GX12 115 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 C17orf51A8MQB3 221 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 OR10H3O60404 316 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 LYPD3O95274 346 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 SNAP29O95721 258 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 SLC6A8P48029 635 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 ALDH3B2P48448 385 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 CCR4P51679 360 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 GAS1P54826 345 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 COPZ1P61923 177 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 MEP1AQ16819 746 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 ZIK1Q3SY52 487 aaPredicted RBP10.25□□□□□ -0.77
USP3-218ENST00000560202 ACER2Q5QJU3 275 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 C6orf52Q5T4I8 152 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 ATP1A1-AS1Q5TC04 95 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 ZNF770Q6IQ21 691 aaPredicted RBP10.25□□□□□ -0.77
USP3-218ENST00000560202 NKAIN4Q8IVV8 208 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 CADM2Q8N3J6 435 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 LINC00471Q8N535 108 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 AQP11Q8NBQ7 271 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 CLEC1AQ8NC01 280 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 DUSP19Q8WTR2 217 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 THAP4Q8WY91 577 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 PRSS27Q9BQR3 290 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 SCNM1Q9BWG6 230 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 METTL7AQ9H8H3 244 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 KLRF1Q9NZS2 232 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 RPS6KB2Q9UBS0 482 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 WASF3Q9UPY6 502 aa10.25□□□□□ -0.77
USP3-218ENST00000560202 ORC6Q9Y5N6 252 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms