RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 FFAR1O14842 300 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 ADAMDEC1O15204 470 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 PEX1O43933 1283 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 NME2P1O60361 137 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 FMO6PO60774 539 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 SEMA7AO75326 666 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 SNX4O95219 450 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 OR5F1O95221 314 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 GADD45GO95257 159 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 H1F0P07305 194 aaKnown RBP9.5□□□□□ -0.89
TPM1-221ENST00000559831 SP1P08047 785 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 GP1BBP13224 206 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 NME2P22392 152 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 MSX1P28360 303 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 MEOX1P50221 254 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 ZNF41P51814 821 aaPredicted RBP9.5□□□□□ -0.89
TPM1-221ENST00000559831 SUMO3P55854 103 aaPredicted RBP9.5□□□□□ -0.89
TPM1-221ENST00000559831 QPRTQ15274 297 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 TOMM34Q15785 309 aaPredicted RBP9.5□□□□□ -0.89
TPM1-221ENST00000559831 FGD3Q5JSP0 725 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 WBP2NLQ6ICG8 309 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 IGFL2Q6UWQ7 119 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 GDF7Q7Z4P5 450 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 GALNTL5Q7Z4T8 443 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 ZNF605Q86T29 641 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 LSRQ86X29 649 aaPredicted RBP9.5□□□□□ -0.89
TPM1-221ENST00000559831 PLCZ1Q86YW0 608 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 SULF2Q8IWU5 870 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 OFCC1Q8IZS5 231 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 ZADH2Q8N4Q0 377 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 WDSUB1Q8N9V3 476 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 KDF1Q8NAX2 398 aaPredicted RBP9.5□□□□□ -0.89
TPM1-221ENST00000559831 OR2M7Q8NG81 312 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 GPR119Q8TDV5 335 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 ADAMTS16Q8TE57 1224 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 PHF10Q8WUB8 498 aaKnown RBP9.5□□□□□ -0.89
TPM1-221ENST00000559831 TM9SF4Q92544 642 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 NR4A3Q92570 626 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 SLC41A3Q96GZ6 507 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 CENPNQ96H22 339 aaPredicted RBP9.5□□□□□ -0.89
TPM1-221ENST00000559831 CRELD1Q96HD1 420 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 FAM173AQ9BQD7 235 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 BDH2Q9BUT1 245 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 PTGES2Q9H7Z7 377 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 HHATLQ9HCP6 504 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 DEPPQ9NTK1 212 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 TAS2R10Q9NYW0 307 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 C6orf203Q9P0P8 240 aaPredicted RBP9.5□□□□□ -0.89
TPM1-221ENST00000559831 RIMS3Q9UJD0 308 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 FBXL2Q9UKC9 423 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 SLC7A7Q9UM01 511 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 ICAM5Q9UMF0 924 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 VDAC3Q9Y277 283 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 KLF13Q9Y2Y9 288 aaPredicted RBP9.5□□□□□ -0.89
TPM1-221ENST00000559831 IGLV3-32A0A0A0MS00 114 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 B4DXG7 233 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 K7EM74 188 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 TRIM3O75382 744 aaPredicted RBP9.49□□□□□ -0.89
TPM1-221ENST00000559831 PRSS23O95084 383 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 PDGFAP04085 211 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 ZNF23P17027 643 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 PTNP21246 168 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 FUT4P22083 530 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 RFC3P40938 356 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 CD97P48960 835 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 TNFSF10P50591 281 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 IST1P53990 364 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 SMIM11AP58511 58 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 PLGLB1Q02325 96 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 SLC34A1Q06495 639 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 ST3GAL3Q11203 375 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 TRAM2Q15035 370 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 TOMM20Q15388 145 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 TRIP10Q15642 601 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 EXOC3L2Q2M3D2 409 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 COLEC12Q5KU26 742 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 TIGD3Q6B0B8 471 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 ZNF613Q6PF04 617 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 POMZP3Q6PJE2 187 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 ARSKQ6UWY0 536 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 FADS6Q8N9I5 356 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 TMEM178AQ8NBL3 297 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 PIK3C3Q8NEB9 887 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 SCMH1Q96GD3 660 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 FRMD6Q96NE9 622 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 GNRHR2Q96P88 292 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 ARHGAP9Q9BRR9 750 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 POLR2J2Q9GZM3 115 aaKnown RBP9.49□□□□□ -0.89
TPM1-221ENST00000559831 POLR2J3Q9H1A7 115 aaKnown RBP9.49□□□□□ -0.89
TPM1-221ENST00000559831 NMNAT1Q9HAN9 279 aaPredicted RBP9.49□□□□□ -0.89
TPM1-221ENST00000559831 DKKL1Q9UK85 242 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 ACAD8Q9UKU7 415 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 BOKQ9UMX3 212 aaPredicted RBP9.49□□□□□ -0.89
TPM1-221ENST00000559831 LYVE1Q9Y5Y7 322 aa9.49□□□□□ -0.89
TPM1-221ENST00000559831 TRAV17A0A0B4J275 112 aa9.48□□□□□ -0.89
TPM1-221ENST00000559831 A0A0B4J2E0 115 aa9.48□□□□□ -0.89
TPM1-221ENST00000559831 TRBV4-1A0A0J9YWV2 114 aa9.48□□□□□ -0.89
TPM1-221ENST00000559831 A0A1B0GX12 115 aa9.48□□□□□ -0.89
TPM1-221ENST00000559831 LRRC3CA6NJW4 275 aa9.48□□□□□ -0.89
TPM1-221ENST00000559831 SHISA8B8ZZ34 492 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms