RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 SYPL1Q16563 259 aa13.27□□□□□ -0.29
RPL28-208ENST00000559463 SGCBQ16585 318 aa13.27□□□□□ -0.29
RPL28-208ENST00000559463 TIGD2Q4W5G0 525 aa13.27□□□□□ -0.29
RPL28-208ENST00000559463 EEF1A1P5Q5VTE0 462 aa13.27□□□□□ -0.29
RPL28-208ENST00000559463 MSANTD1Q6ZTZ1 278 aa13.27□□□□□ -0.29
RPL28-208ENST00000559463 ESPNLQ6ZVH7 1005 aa13.27□□□□□ -0.29
RPL28-208ENST00000559463 BTLAQ7Z6A9 289 aa13.27□□□□□ -0.29
RPL28-208ENST00000559463 LILRA2Q8N149 483 aa13.27□□□□□ -0.29
RPL28-208ENST00000559463 ZNF619Q8N2I2 560 aa13.27□□□□□ -0.29
RPL28-208ENST00000559463 MIER2Q8N344 545 aa13.27□□□□□ -0.29
RPL28-208ENST00000559463 GOLGA6L1Q8N7Z2 621 aa13.27□□□□□ -0.29
RPL28-208ENST00000559463 ANKFN1Q8N957 763 aa13.27□□□□□ -0.29
RPL28-208ENST00000559463 TOR1AIP2Q8NFQ8 470 aa13.27□□□□□ -0.29
RPL28-208ENST00000559463 OR5W2Q8NH69 310 aa13.27□□□□□ -0.29
RPL28-208ENST00000559463 OR2V1Q8NHB1 315 aa13.27□□□□□ -0.29
RPL28-208ENST00000559463 ZFP90Q8TF47 636 aa13.27□□□□□ -0.29
RPL28-208ENST00000559463 FAM222BQ8WU58 562 aa13.27□□□□□ -0.29
RPL28-208ENST00000559463 VPS33AQ96AX1 596 aa13.27□□□□□ -0.29
RPL28-208ENST00000559463 KLHL15Q96M94 604 aa13.27□□□□□ -0.29
RPL28-208ENST00000559463 LAT2Q9GZY6 243 aa13.27□□□□□ -0.29
RPL28-208ENST00000559463 QRSL1Q9H0R6 528 aaKnown RBP13.27□□□□□ -0.29
RPL28-208ENST00000559463 TCF7L2Q9NQB0 619 aa13.27□□□□□ -0.29
RPL28-208ENST00000559463 INTS9Q9NV88 658 aaKnown RBP13.27□□□□□ -0.29
RPL28-208ENST00000559463 GPC6Q9Y625 555 aaPredicted RBP13.27□□□□□ -0.29
RPL28-208ENST00000559463 HIVEP1P15822 2718 aa13.27□□□□□ -0.29
RPL28-208ENST00000559463 FAM234BA2RU67 622 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 TUBAL3A6NHL2 446 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 MSTNO14793 375 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 POLR3GO15318 223 aaPredicted RBP13.26□□□□□ -0.29
RPL28-208ENST00000559463 CTAG2O75638 210 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 SMNDC1O75940 238 aaKnown RBP eCLIP13.26□□□□□ -0.29
RPL28-208ENST00000559463 CSTAP01040 98 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 CGAP01215 116 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 UBTFL6P0CB48 400 aaPredicted RBP13.26□□□□□ -0.29
RPL28-208ENST00000559463 FCGR2AP12318 317 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 NID1P14543 1247 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 ADH6P28332 368 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 CPOXP36551 454 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 PGM1P36871 562 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 MRPL19P49406 292 aaKnown RBP13.26□□□□□ -0.29
RPL28-208ENST00000559463 MAPK11Q15759 364 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 GTDC1Q4AE62 458 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 GPAT3Q53EU6 434 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 SLC25A53Q5H9E4 307 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 HBMQ6B0K9 141 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 PPP4R4Q6NUP7 873 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 CDH24Q86UP0 819 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 KIF18BQ86Y91 864 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 LINC01560Q8TB33 94 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 DYDC1Q8WWB3 177 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 OIT3Q8WWZ8 545 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 MRGPRX4Q96LA9 322 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 THUMPD3Q9BV44 507 aaKnown RBP13.26□□□□□ -0.29
RPL28-208ENST00000559463 SRXN1Q9BYN0 137 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 OPN3Q9H1Y3 402 aaPredicted RBP13.26□□□□□ -0.29
RPL28-208ENST00000559463 SLC38A1Q9H2H9 487 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 COQ10BQ9H8M1 238 aa13.26□□□□□ -0.29
RPL28-208ENST00000559463 MED13LQ71F56 2210 aa13.25□□□□□ -0.29
RPL28-208ENST00000559463 FAM221AA4D161 298 aa13.25□□□□□ -0.29
RPL28-208ENST00000559463 CLDN24A6NM45 220 aa13.25□□□□□ -0.29
RPL28-208ENST00000559463 A6NNC1 897 aa13.25□□□□□ -0.29
RPL28-208ENST00000559463 ADAM11O75078 769 aa13.25□□□□□ -0.29
RPL28-208ENST00000559463 CYP7B1O75881 506 aa13.25□□□□□ -0.29
RPL28-208ENST00000559463 RPS4Y1P22090 263 aaKnown RBP13.25□□□□□ -0.29
RPL28-208ENST00000559463 AQP5P55064 265 aa13.25□□□□□ -0.29
RPL28-208ENST00000559463 TXNL4AP83876 142 aaKnown RBP13.25□□□□□ -0.29
RPL28-208ENST00000559463 HPCAP84074 193 aa13.25□□□□□ -0.29
RPL28-208ENST00000559463 ZNF474Q6S9Z5 364 aaPredicted RBP13.25□□□□□ -0.29
RPL28-208ENST00000559463 EIF3MQ7L2H7 374 aaKnown RBP13.25□□□□□ -0.29
RPL28-208ENST00000559463 CKAP2Q8WWK9 683 aa13.25□□□□□ -0.29
RPL28-208ENST00000559463 NRGNQ92686 78 aa13.25□□□□□ -0.29
RPL28-208ENST00000559463 AURKBQ96GD4 344 aaPredicted RBP13.25□□□□□ -0.29
RPL28-208ENST00000559463 ITCHQ96J02 903 aa13.25□□□□□ -0.29
RPL28-208ENST00000559463 TRNT1Q96Q11 434 aaKnown RBP13.25□□□□□ -0.29
RPL28-208ENST00000559463 GPATCH1Q9BRR8 931 aaKnown RBP13.25□□□□□ -0.29
RPL28-208ENST00000559463 CCDC28BQ9BUN5 200 aa13.25□□□□□ -0.29
RPL28-208ENST00000559463 PAQR5Q9NXK6 330 aaPredicted RBP13.25□□□□□ -0.29
RPL28-208ENST00000559463 MCTS1Q9ULC4 181 aaKnown RBP13.25□□□□□ -0.29
RPL28-208ENST00000559463 LIPT1Q9Y234 373 aa13.25□□□□□ -0.29
RPL28-208ENST00000559463 SLC35A3Q9Y2D2 325 aa13.25□□□□□ -0.29
RPL28-208ENST00000559463 ITPR3Q14573 2671 aa13.25□□□□□ -0.29
RPL28-208ENST00000559463 ENO4A6NNW6 628 aa13.24□□□□□ -0.29
RPL28-208ENST00000559463 SS18L1O75177 396 aaPredicted RBP13.24□□□□□ -0.29
RPL28-208ENST00000559463 KRT75O95678 551 aa13.24□□□□□ -0.29
RPL28-208ENST00000559463 ZCCHC18P0CG32 403 aa13.24□□□□□ -0.29
RPL28-208ENST00000559463 EPXP11678 715 aa13.24□□□□□ -0.29
RPL28-208ENST00000559463 HOXB9P17482 250 aaPredicted RBP13.24□□□□□ -0.29
RPL28-208ENST00000559463 CCKARP32238 428 aa13.24□□□□□ -0.29
RPL28-208ENST00000559463 ANXA11P50995 505 aaKnown RBP13.24□□□□□ -0.29
RPL28-208ENST00000559463 KCNJ10P78508 379 aa13.24□□□□□ -0.29
RPL28-208ENST00000559463 SELENBP1Q13228 472 aa13.24□□□□□ -0.29
RPL28-208ENST00000559463 ZNF239Q16600 458 aaKnown RBP13.24□□□□□ -0.29
RPL28-208ENST00000559463 TMEM176BQ3YBM2 270 aaPredicted RBP13.24□□□□□ -0.29
RPL28-208ENST00000559463 SLC2A7Q6PXP3 512 aa13.24□□□□□ -0.29
RPL28-208ENST00000559463 LRRC74BQ6ZQY2 392 aa13.24□□□□□ -0.29
RPL28-208ENST00000559463 FAM214BQ7L5A3 538 aa13.24□□□□□ -0.29
RPL28-208ENST00000559463 FUNDC1Q8IVP5 155 aa13.24□□□□□ -0.29
RPL28-208ENST00000559463 ATP6V1C2Q8NEY4 427 aa13.24□□□□□ -0.29
RPL28-208ENST00000559463 ST8SIA1Q92185 356 aa13.24□□□□□ -0.29
RPL28-208ENST00000559463 GTF2H4Q92759 462 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms