RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 SIAH2O43255 324 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 SRPX2O60687 465 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-248ENST00000558190 BMP8BP34820 402 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 ADCYAP1R1P41586 468 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 TNK1Q13470 666 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 BMP8AQ7Z5Y6 402 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 PXKQ7Z7A4 578 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 TCTE3Q8IZS6 198 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 FN3KRPQ9HA64 309 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 TRAPPC1Q9Y5R8 145 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 ACTL7AQ9Y615 435 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 NPATQ14207 1427 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 SERTM2A0A1B0GWG4 89 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 GLRA1P23415 457 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 GRPRP30550 384 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 GDI1P31150 447 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 TMPRSS12Q86WS5 348 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 PLPP5Q8NEB5 264 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 C5orf34Q96MH7 638 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 ATP5SQ99766 215 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 ZCCHC3Q9NUD5 404 aaKnown RBP3.47□□□□□ -1.85
ATXN3-248ENST00000558190 NLE1Q9NVX2 485 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-248ENST00000558190 FAM198AQ9UFP1 575 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 CNTNAP4Q9C0A0 1308 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 MAT1AQ00266 395 aaKnown RBP3.47□□□□□ -1.85
ATXN3-248ENST00000558190 ENPP2Q13822 863 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 CLECL1Q8IZS7 167 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 STPG2Q8N412 459 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 EGLN2Q96KS0 407 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 HS3ST4Q9Y661 456 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 CSNK1G3Q9Y6M4 447 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 RAB27BO00194 218 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 CASC3O15234 703 aaKnown RBP3.47□□□□□ -1.85
ATXN3-248ENST00000558190 NID1P14543 1247 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 FABP4P15090 132 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 EPHA2P29317 976 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 POU3F4P49335 361 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 KEAP1Q14145 624 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 TMEM241Q24JQ0 296 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF550Q7Z398 422 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 CHAC2Q8WUX2 184 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 URM1Q9BTM9 101 aaKnown RBP3.47□□□□□ -1.85
ATXN3-248ENST00000558190 C12orf10Q9HB07 376 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 SIX4Q9UIU6 781 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 SLC16A5O15375 505 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 PSEN2P49810 448 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 CPT1AP50416 773 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF84P51523 738 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 ACSM5Q6NUN0 579 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 KIRREL1Q96J84 757 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 ERVW-1Q9UQF0 538 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 GRM6O15303 877 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 CYB5BO43169 146 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 PLGP00747 810 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-248ENST00000558190 RPS18P62269 152 aaKnown RBP3.47□□□□□ -1.85
ATXN3-248ENST00000558190 UNC5DQ6UXZ4 953 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 TMPRSS11BQ86T26 416 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 CELF5Q8N6W0 485 aaKnown RBP3.47□□□□□ -1.85
ATXN3-248ENST00000558190 IL22RA2Q969J5 263 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 DAZAP1Q96EP5 407 aaKnown RBP3.47□□□□□ -1.85
ATXN3-248ENST00000558190 SYT11Q9BT88 431 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 C11orf84Q9BUA3 381 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-248ENST00000558190 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.47□□□□□ -1.85
ATXN3-248ENST00000558190 MRPL17Q9NRX2 175 aaKnown RBP3.47□□□□□ -1.85
ATXN3-248ENST00000558190 PLA2G10O15496 165 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 HLA-DQB2P05538 268 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 NSG1P42857 185 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 CASP6P55212 293 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 OR52N2Q8NGI0 321 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 OR8D4Q8NGM9 314 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 SLC25A46Q96AG3 418 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 ECHDC3Q96DC8 303 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 HRASLS5Q96KN8 279 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 SPOCK3Q9BQ16 436 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 POLDIP3Q9BY77 421 aaKnown RBP3.47□□□□□ -1.85
ATXN3-248ENST00000558190 EFCAB5A4FU69 1503 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 M0QZK8 103 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 GGCTO75223 188 aaKnown RBP3.47□□□□□ -1.85
ATXN3-248ENST00000558190 DIRAS3O95661 229 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 OR4Q2P0C623 313 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 ELAVL2Q12926 359 aaKnown RBP3.47□□□□□ -1.85
ATXN3-248ENST00000558190 SFXN5Q8TD22 340 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 EXTL1Q92935 676 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 SGIP1Q9BQI5 828 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 TTTY10Q9BZA0 68 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF275Q9NSD4 429 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-248ENST00000558190 NME7Q9Y5B8 376 aa3.47□□□□□ -1.85
ATXN3-248ENST00000558190 GNRH1P01148 92 aa3.46□□□□□ -1.85
ATXN3-248ENST00000558190 DBHP09172 617 aa3.46□□□□□ -1.85
ATXN3-248ENST00000558190 FOLR1P15328 257 aa3.46□□□□□ -1.85
ATXN3-248ENST00000558190 ENDOGQ14249 297 aaKnown RBP3.46□□□□□ -1.85
ATXN3-248ENST00000558190 MOB1BQ7L9L4 216 aa3.46□□□□□ -1.85
ATXN3-248ENST00000558190 LRRTM3Q86VH5 581 aa3.46□□□□□ -1.85
ATXN3-248ENST00000558190 GIMAP5Q96F15 307 aa3.46□□□□□ -1.85
ATXN3-248ENST00000558190 TRAPPC4Q9Y296 219 aa3.46□□□□□ -1.85
ATXN3-248ENST00000558190 IFNA1P01562 189 aa3.46□□□□□ -1.85
ATXN3-248ENST00000558190 FCGR2CP31995 323 aa3.46□□□□□ -1.85
ATXN3-248ENST00000558190 CRYBB2P43320 205 aa3.46□□□□□ -1.85
ATXN3-248ENST00000558190 GPR50Q13585 617 aa3.46□□□□□ -1.85
ATXN3-248ENST00000558190 PCK2Q16822 640 aa3.46□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms