RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 CDK16Q00536 496 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 ZNF155Q12901 538 aaPredicted RBP8.06□□□□□ -1.12
NEDD1-211ENST00000557454 ERCC6LQ2NKX8 1250 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 SLC9B1Q4ZJI4 515 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 AVPI1Q5T686 147 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 IKBIPQ70UQ0 350 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 AGGF1Q8N302 714 aaeCLIP8.06□□□□□ -1.12
NEDD1-211ENST00000557454 C17orf78Q8N4C9 275 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 GATSQ8NAP1 163 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 ATP6V1C2Q8NEY4 427 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 ZFP90Q8TF47 636 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 RDH5Q92781 318 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 KLHL29Q96CT2 875 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 RAB39BQ96DA2 213 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 SLC38A2Q96QD8 506 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 BPIFA3Q9BQP9 254 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 KATNB1Q9BVA0 655 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 TNFRSF19Q9NS68 423 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 ABHD10Q9NUJ1 306 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 VWA7Q9Y334 891 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 PCDHGB5Q9Y5G0 923 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 MDFIC2A0A1B0GVS7 189 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 A0A1W2PNR3 127 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 MAGEB16A2A368 324 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 CCDC151A5D8V7 595 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 A6NJY4 79 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 C3orf84H3BNL1 204 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 PDLIM1O00151 329 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 FOXE1O00358 373 aaPredicted RBP8.05□□□□□ -1.12
NEDD1-211ENST00000557454 HOXA3O43365 443 aaPredicted RBP8.05□□□□□ -1.12
NEDD1-211ENST00000557454 EFNA2O43921 213 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 BCAS2O75934 225 aaPredicted RBP8.05□□□□□ -1.12
NEDD1-211ENST00000557454 CLPXO76031 633 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 UTS2O95399 124 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 WNT11O96014 354 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 IGHV2-5P01817 119 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 PTX3P26022 381 aaPredicted RBP8.05□□□□□ -1.12
NEDD1-211ENST00000557454 ELK4P28324 431 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 CALCRP30988 508 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 PRPS1P60891 318 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 PRR5P85299 388 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 PSG6Q00889 435 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 NAAAQ02083 359 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 MVKQ03426 396 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 GRAMD1BQ3KR37 738 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 GRHL2Q6ISB3 625 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 FAM45BPQ6NSW5 357 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 KLHL24Q6TFL4 600 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 FIP1L1Q6UN15 594 aaKnown RBP8.05□□□□□ -1.12
NEDD1-211ENST00000557454 ZNF771Q7L3S4 317 aaPredicted RBP8.05□□□□□ -1.12
NEDD1-211ENST00000557454 R3HCC1LQ7Z5L2 792 aaKnown RBP8.05□□□□□ -1.12
NEDD1-211ENST00000557454 MYLK4Q86YV6 388 aaPredicted RBP8.05□□□□□ -1.12
NEDD1-211ENST00000557454 WDFY1Q8IWB7 410 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 TCAIMQ8N3R3 496 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 DEFB108BQ8NET1 73 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 OR9A2Q8NGT5 310 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 FAM45AQ8TCE6 357 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 ZNF675Q8TD23 568 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 ANKRD49Q8WVL7 239 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 POP5Q969H6 163 aaKnown RBP8.05□□□□□ -1.12
NEDD1-211ENST00000557454 CNRIP1Q96F85 164 aaPredicted RBP8.05□□□□□ -1.12
NEDD1-211ENST00000557454 SH3YL1Q96HL8 342 aaPredicted RBP8.05□□□□□ -1.12
NEDD1-211ENST00000557454 MRGPRX4Q96LA9 322 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 ZNF442Q9H7R0 627 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 SEC61A2Q9H9S3 476 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 OXSMQ9NWU1 459 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 PCDHA9Q9Y5H5 950 aa8.05□□□□□ -1.12
NEDD1-211ENST00000557454 STAB2Q8WWQ8 2551 aa8.04□□□□□ -1.12
NEDD1-211ENST00000557454 GJE1A6NN92 205 aa8.04□□□□□ -1.12
NEDD1-211ENST00000557454 K7EIL1 84 aa8.04□□□□□ -1.12
NEDD1-211ENST00000557454 PIP5K1BO14986 540 aa8.04□□□□□ -1.12
NEDD1-211ENST00000557454 RP2O75695 350 aa8.04□□□□□ -1.12
NEDD1-211ENST00000557454 NCR1O76036 304 aa8.04□□□□□ -1.12
NEDD1-211ENST00000557454 BMP2P12643 396 aa8.04□□□□□ -1.12
NEDD1-211ENST00000557454 SERPINB4P48594 390 aa8.04□□□□□ -1.12
NEDD1-211ENST00000557454 ATP4BP51164 291 aa8.04□□□□□ -1.12
NEDD1-211ENST00000557454 PROK1P58294 105 aa8.04□□□□□ -1.12
NEDD1-211ENST00000557454 RAC3P60763 192 aa8.04□□□□□ -1.12
NEDD1-211ENST00000557454 LCN2P80188 198 aa8.04□□□□□ -1.12
NEDD1-211ENST00000557454 HGFACQ04756 655 aa8.04□□□□□ -1.12
NEDD1-211ENST00000557454 SLC18A2Q05940 514 aa8.04□□□□□ -1.12
NEDD1-211ENST00000557454 CUL3Q13618 768 aa8.04□□□□□ -1.12
NEDD1-211ENST00000557454 PDCD1Q15116 288 aa8.04□□□□□ -1.12
NEDD1-211ENST00000557454 DECR1Q16698 335 aa8.04□□□□□ -1.12
NEDD1-211ENST00000557454 CYP27C1Q4G0S4 372 aa8.04□□□□□ -1.12
NEDD1-211ENST00000557454 HIKESHIQ53FT3 197 aa8.04□□□□□ -1.12
NEDD1-211ENST00000557454 TREML1Q86YW5 311 aa8.04□□□□□ -1.12
NEDD1-211ENST00000557454 C1orf162Q8NEQ5 155 aaPredicted RBP8.04□□□□□ -1.12
NEDD1-211ENST00000557454 NUP37Q8NFH4 326 aa8.04□□□□□ -1.12
NEDD1-211ENST00000557454 RBMXL1Q96E39 390 aaKnown RBP8.04□□□□□ -1.12
NEDD1-211ENST00000557454 KTI12Q96EK9 354 aaPredicted RBP8.04□□□□□ -1.12
NEDD1-211ENST00000557454 FRMD8P1Q9BZ68 369 aaPredicted RBP8.04□□□□□ -1.12
NEDD1-211ENST00000557454 MS4A7Q9GZW8 240 aaPredicted RBP8.04□□□□□ -1.12
NEDD1-211ENST00000557454 PFDN4Q9NQP4 134 aa8.04□□□□□ -1.12
NEDD1-211ENST00000557454 NOSIPQ9Y314 301 aaKnown RBP8.04□□□□□ -1.12
NEDD1-211ENST00000557454 ARHGAP32A7KAX9 2087 aa8.04□□□□□ -1.12
NEDD1-211ENST00000557454 CSMD3Q7Z407 3707 aa8.04□□□□□ -1.12
NEDD1-211ENST00000557454 IGHV3OR16-10A0A075B7F0 116 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 C1orf226A1L170 272 aa8.03□□□□□ -1.12
NEDD1-211ENST00000557454 ZNF195O14628 629 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms