RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 CCDC167Q9P0B6 97 aa9.27□□□□□ -0.93
SHMT2-224ENST00000556737 BTNL2Q9UIR0 455 aa9.27□□□□□ -0.93
SHMT2-224ENST00000556737 DTNAQ9Y4J8 743 aa9.27□□□□□ -0.93
SHMT2-224ENST00000556737 VPS13CQ709C8 3753 aa9.27□□□□□ -0.93
SHMT2-224ENST00000556737 LOC100653049A0A140TA62 436 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 SERINC4A6NH21 518 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 DUXAA6NLW8 204 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 A6NNC1 897 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 A8MXE2 369 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 MSTNO14793 375 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 ADAMDEC1O15204 470 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 CXCL13O43927 109 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 DNAJA2O60884 412 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 BCAS1O75363 584 aaPredicted RBP9.26□□□□□ -0.93
SHMT2-224ENST00000556737 SLC22A3O75751 556 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 UGT2B17O75795 530 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 KRT34O76011 436 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 CPSF4O95639 269 aaKnown RBP9.26□□□□□ -0.93
SHMT2-224ENST00000556737 PGRP06401 933 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 GUSBP08236 651 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 OR12D1P0DN82 309 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 UBL4AP11441 157 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 FCGR2AP12318 317 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 PRKCAP17252 672 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 ELK4P28324 431 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 S100A3P33764 101 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 CPA2P48052 419 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 KHKP50053 298 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 ATP4BP51164 291 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 RPS3AP61247 264 aaKnown RBP9.26□□□□□ -0.93
SHMT2-224ENST00000556737 RAC1P63000 192 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 SIRPAP78324 504 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 DAZAP2Q15038 168 aaPredicted RBP9.26□□□□□ -0.93
SHMT2-224ENST00000556737 MAPK14Q16539 360 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 PDCD4Q53EL6 469 aaKnown RBP9.26□□□□□ -0.93
SHMT2-224ENST00000556737 SLC25A53Q5H9E4 307 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 AP1ARQ63HQ0 302 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 TYW3Q6IPR3 259 aaKnown RBP9.26□□□□□ -0.93
SHMT2-224ENST00000556737 ZNF474Q6S9Z5 364 aaPredicted RBP9.26□□□□□ -0.93
SHMT2-224ENST00000556737 C6orf89Q6UWU4 347 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 FRRS1Q6ZNA5 592 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 SNX32Q86XE0 403 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 KIF18BQ86Y91 864 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 FAM71CQ8NEG0 241 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 OR2V1Q8NHB1 315 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 LINC01560Q8TB33 94 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 GPR119Q8TDV5 335 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 RAB8BQ92930 207 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 CMTM5Q96DZ9 223 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 ARSGQ96EG1 525 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 NSL1Q96IY1 281 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 SLC35A5Q9BS91 424 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 INPP5KQ9BT40 448 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 OPN3Q9H1Y3 402 aaPredicted RBP9.26□□□□□ -0.93
SHMT2-224ENST00000556737 COQ10BQ9H8M1 238 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 RASSF1Q9NS23 344 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 SLC6A13Q9NSD5 602 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 ARL8BQ9NVJ2 186 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 TAGLN3Q9UI15 199 aa9.26□□□□□ -0.93
SHMT2-224ENST00000556737 A0A0J9YW62 118 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 TUBAL3A6NHL2 446 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 HMGN4O00479 90 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 TNFSF11O14788 317 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 SLC22A2O15244 555 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 ZNF264O43296 627 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 EIF4E2O60573 245 aaKnown RBP9.25□□□□□ -0.93
SHMT2-224ENST00000556737 SS18L1O75177 396 aaPredicted RBP9.25□□□□□ -0.93
SHMT2-224ENST00000556737 STX11O75558 287 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 SMNDC1O75940 238 aaKnown RBP eCLIP9.25□□□□□ -0.93
SHMT2-224ENST00000556737 OPN1LWP04000 364 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 CD8BP10966 210 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 COX4I1P13073 169 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 CPOXP36551 454 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 EIF1P41567 113 aaKnown RBP9.25□□□□□ -0.93
SHMT2-224ENST00000556737 EIF1AXP47813 144 aaKnown RBP9.25□□□□□ -0.93
SHMT2-224ENST00000556737 MVDP53602 400 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 EEF1A1P68104 462 aaKnown RBP9.25□□□□□ -0.93
SHMT2-224ENST00000556737 IRX1P78414 480 aaPredicted RBP9.25□□□□□ -0.93
SHMT2-224ENST00000556737 CYLC2Q14093 348 aaPredicted RBP9.25□□□□□ -0.93
SHMT2-224ENST00000556737 FGFBP1Q14512 234 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 KRT72Q14CN4 511 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 GPR68Q15743 365 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 ZNF239Q16600 458 aaKnown RBP9.25□□□□□ -0.93
SHMT2-224ENST00000556737 EEF1A1P5Q5VTE0 462 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 ESPNLQ6ZVH7 1005 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 CHMP1BQ7LBR1 199 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 C16orf62Q7Z3J2 963 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 TREML1Q86YW5 311 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 TMCO5AQ8N6Q1 288 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 ZNF614Q8N883 585 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 CNEP1R1Q8N9A8 125 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 VPS37AQ8NEZ2 397 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 OR9I1Q8NGQ6 314 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 FBXO27Q8NI29 283 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 KLHL15Q96M94 604 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 SRXN1Q9BYN0 137 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 SAP130Q9H0E3 1048 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 CLEC4MQ9H2X3 399 aaPredicted RBP9.25□□□□□ -0.93
SHMT2-224ENST00000556737 POLE3Q9NRF9 147 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 SDR39U1Q9NRG7 319 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms