RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 AMDHD1Q96NU7 426 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 BBS4Q96RK4 519 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 PINK1Q9BXM7 581 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 OR10A4Q9H209 315 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 SLCO5A1Q9H2Y9 848 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 GLIPR2Q9H4G4 154 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 GSTO2Q9H4Y5 243 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 Q9N2J8 555 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 PLSCR4Q9NRQ2 329 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 PAQR5Q9NXK6 330 aaPredicted RBP8.94□□□□□ -0.98
SCFD1-220ENST00000556486 SENP1Q9P0U3 644 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 NTMQ9P121 344 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 MRTO4Q9UKD2 239 aaKnown RBP8.94□□□□□ -0.98
SCFD1-220ENST00000556486 COA3Q9Y2R0 106 aaPredicted RBP8.94□□□□□ -0.98
SCFD1-220ENST00000556486 ZNF281Q9Y2X9 895 aa8.94□□□□□ -0.98
SCFD1-220ENST00000556486 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.94□□□□□ -0.98
SCFD1-220ENST00000556486 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.94□□□□□ -0.988e-15■□□□□ 10.6
SCFD1-220ENST00000556486 C22orf46C9J442 243 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 UBFD1O14562 309 aaKnown RBP8.93□□□□□ -0.98
SCFD1-220ENST00000556486 ADAMDEC1O15204 470 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 CLOCKO15516 846 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 SCO2O43819 266 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 RSL1D1O76021 490 aaKnown RBP8.93□□□□□ -0.98
SCFD1-220ENST00000556486 IGHV4-39P01824 125 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 JUNP05412 331 aaKnown RBP8.93□□□□□ -0.98
SCFD1-220ENST00000556486 OSMP13725 252 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 HK1P19367 917 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 PTNP21246 168 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 PRPH2P23942 346 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 CLK3P49761 638 aaKnown RBP8.93□□□□□ -0.98
SCFD1-220ENST00000556486 NCBP2P52298 156 aaKnown RBP eCLIP8.93□□□□□ -0.98
SCFD1-220ENST00000556486 CLDN20P56880 219 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 RPS3AP61247 264 aaKnown RBP8.93□□□□□ -0.98
SCFD1-220ENST00000556486 RPS4XP62701 263 aaKnown RBP8.93□□□□□ -0.98
SCFD1-220ENST00000556486 ZNF155Q12901 538 aaPredicted RBP8.93□□□□□ -0.98
SCFD1-220ENST00000556486 PON3Q15166 354 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 C6orf52Q5T4I8 152 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 TRMT10CQ7L0Y3 403 aaKnown RBP8.93□□□□□ -0.98
SCFD1-220ENST00000556486 THAP5Q7Z6K1 395 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 GGNQ86UU5 652 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 C17orf53Q8N3J3 647 aaPredicted RBP8.93□□□□□ -0.98
SCFD1-220ENST00000556486 OR6K3Q8NGY3 331 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 DUSP19Q8WTR2 217 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 ADGRG7Q96K78 797 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 KCNA7Q96RP8 456 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 BEX2Q9BXY8 128 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 QRSL1Q9H0R6 528 aaKnown RBP8.93□□□□□ -0.98
SCFD1-220ENST00000556486 MIEF1Q9NQG6 463 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 DDX18Q9NVP1 670 aaKnown RBP8.93□□□□□ -0.98
SCFD1-220ENST00000556486 FLRT3Q9NZU0 649 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 MED11Q9P086 117 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 STOML1Q9UBI4 398 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 CCL27Q9Y4X3 112 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 TIMM22Q9Y584 194 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 ATP23Q9Y6H3 246 aa8.93□□□□□ -0.98
SCFD1-220ENST00000556486 PCNX3Q9H6A9 2034 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 A0A087WZY1 265 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 SEC14L5O43304 696 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 KCNAB3O43448 404 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 TBX19O60806 448 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 SS18L1O75177 396 aaPredicted RBP8.92□□□□□ -0.98
SCFD1-220ENST00000556486 AQP8O94778 261 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 NKX2-2O95096 273 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 TBXA2RP21731 343 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 PSMA4P25789 261 aaKnown RBP8.92□□□□□ -0.98
SCFD1-220ENST00000556486 NTSP30990 170 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 LCN1P31025 176 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 IDUAP35475 653 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 FRKP42685 505 aaPredicted RBP8.92□□□□□ -0.98
SCFD1-220ENST00000556486 FOXA1P55317 472 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 TEKQ02763 1124 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 C2orf80Q0P641 193 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 KIAA0040Q15053 153 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 ZNHIT3Q15649 155 aaPredicted RBP8.92□□□□□ -0.98
SCFD1-220ENST00000556486 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.92□□□□□ -0.98
SCFD1-220ENST00000556486 CT83Q5H943 113 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 BEX5Q5H9J7 111 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 TEX35Q5T0J7 233 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 TMEM107Q6UX40 140 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 APOOLQ6UXV4 268 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 RNF165Q6ZSG1 346 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 SH2D5Q6ZV89 423 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 OVCH2Q7RTZ1 564 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 ATG4DQ86TL0 474 aaPredicted RBP8.92□□□□□ -0.98
SCFD1-220ENST00000556486 GTPBP8Q8N3Z3 284 aaPredicted RBP8.92□□□□□ -0.98
SCFD1-220ENST00000556486 ZNF611Q8N823 705 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 MNS1Q8NEH6 495 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 OR5M1Q8NGP8 315 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 ACTRT2Q8TDY3 377 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 MZB1Q8WU39 189 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 IFT81Q8WYA0 676 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 HTRA1Q92743 480 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 GMPPAQ96IJ6 420 aaPredicted RBP8.92□□□□□ -0.98
SCFD1-220ENST00000556486 FCRL1Q96LA6 429 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 C16orf92Q96LL3 132 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 TMEM204Q9BSN7 226 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 EBPLQ9BY08 206 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 TBL1XR1Q9BZK7 514 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 AMBRA1Q9C0C7 1298 aa8.92□□□□□ -0.98
SCFD1-220ENST00000556486 C3orf14Q9HBI5 128 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms